Spark-based Parallelization of Basic Local Alignment Search Tool

Sequence alignment is a key link of bioinformatics analysis. The basic local alignment search tool (BLAST) is a popular sequence alignment algorithm with high accuracy. However, the BLAST is inefficient in comparing and analyzing a massive amount of gene sequencing data. To solve the problem, this p...

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Bibliographic Details
Main Authors: Hui Wang, Leixiao Li, Chengdong Zhou, Hao Lin, Dan Deng
Format: Article
Language:English
Published: Bulgarian Academy of Sciences 2020-03-01
Series:International Journal Bioautomation
Subjects:
Online Access:http://www.biomed.bas.bg/bioautomation/2020/vol_24.1/files/24.1_08.pdf