Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir
The hydronium salt (H3O)2[Cu(N7–acv)2(H2O)2(SO4)2]·2H2O (1, acv = acyclovir) has been synthesized and characterized by single-crystal X-ray diffraction and spectral methods. Solvated Cu(OH)2 is a by-product of the synthesis. In the all-trans centrosymmetric complex anion, (a) the Cu(II) atom exhibit...
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doaj-09bd0f8e0e404c8d9b97355cadb2d0912020-11-25T00:12:20ZengMDPI AGCrystals2073-43522016-10-0161113910.3390/cryst6110139cryst6110139Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in AcyclovirEsther Vílchez-Rodríguez0Inmaculada Pérez-Toro1Antonio Bauzá2Antonio Matilla-Hernández3Department of Inorganic Chemistry, Faculty of Pharmacy, University of Granada, 18071 Granada, SpainDepartment of Inorganic Chemistry, Faculty of Pharmacy, University of Granada, 18071 Granada, SpainDepartment of Chemistry, Faculty of Science, University of the Balearic Islands, Crta. de Valldemossa km 7.5, 07122 Palma de Mallorca (Baleares), SpainDepartment of Inorganic Chemistry, Faculty of Pharmacy, University of Granada, 18071 Granada, SpainThe hydronium salt (H3O)2[Cu(N7–acv)2(H2O)2(SO4)2]·2H2O (1, acv = acyclovir) has been synthesized and characterized by single-crystal X-ray diffraction and spectral methods. Solvated Cu(OH)2 is a by-product of the synthesis. In the all-trans centrosymmetric complex anion, (a) the Cu(II) atom exhibits an elongated octahedral coordination; (b) the metal-binding pattern of acyclovir (acv) consists of a Cu–N7(acv) bond plus an (aqua)O–H···O6(acv) interligand interaction; and (c) trans-apical/distal sites are occupied by monodentate O-sulfate donor anions. Neutral acyclovir and aqua-proximal ligands occupy the basal positions, stabilizing the metal binding pattern of acv. Each hydronium(1+) ion builds three H-bonds with O–sulfate, O6(acv), and O–alcohol(acv) from three neighboring complex anions. No O atoms of solvent water molecules are involved as acceptors. Theoretical calculations of molecular electrostatic potential surfaces and atomic charges also support that the O-alcohol of the N9(acv) side chain is a better H-acceptor than the N3 or the O-ether atoms of acv.http://www.mdpi.com/2073-4352/6/11/139copper(II)mixed-ligandhydroniumcrystal structureDFT calculationsinterligand interactions |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Esther Vílchez-Rodríguez Inmaculada Pérez-Toro Antonio Bauzá Antonio Matilla-Hernández |
spellingShingle |
Esther Vílchez-Rodríguez Inmaculada Pérez-Toro Antonio Bauzá Antonio Matilla-Hernández Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir Crystals copper(II) mixed-ligand hydronium crystal structure DFT calculations interligand interactions |
author_facet |
Esther Vílchez-Rodríguez Inmaculada Pérez-Toro Antonio Bauzá Antonio Matilla-Hernández |
author_sort |
Esther Vílchez-Rodríguez |
title |
Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir |
title_short |
Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir |
title_full |
Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir |
title_fullStr |
Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir |
title_full_unstemmed |
Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir |
title_sort |
structural and theoretical evidence of the depleted proton affinity of the n3-atom in acyclovir |
publisher |
MDPI AG |
series |
Crystals |
issn |
2073-4352 |
publishDate |
2016-10-01 |
description |
The hydronium salt (H3O)2[Cu(N7–acv)2(H2O)2(SO4)2]·2H2O (1, acv = acyclovir) has been synthesized and characterized by single-crystal X-ray diffraction and spectral methods. Solvated Cu(OH)2 is a by-product of the synthesis. In the all-trans centrosymmetric complex anion, (a) the Cu(II) atom exhibits an elongated octahedral coordination; (b) the metal-binding pattern of acyclovir (acv) consists of a Cu–N7(acv) bond plus an (aqua)O–H···O6(acv) interligand interaction; and (c) trans-apical/distal sites are occupied by monodentate O-sulfate donor anions. Neutral acyclovir and aqua-proximal ligands occupy the basal positions, stabilizing the metal binding pattern of acv. Each hydronium(1+) ion builds three H-bonds with O–sulfate, O6(acv), and O–alcohol(acv) from three neighboring complex anions. No O atoms of solvent water molecules are involved as acceptors. Theoretical calculations of molecular electrostatic potential surfaces and atomic charges also support that the O-alcohol of the N9(acv) side chain is a better H-acceptor than the N3 or the O-ether atoms of acv. |
topic |
copper(II) mixed-ligand hydronium crystal structure DFT calculations interligand interactions |
url |
http://www.mdpi.com/2073-4352/6/11/139 |
work_keys_str_mv |
AT esthervilchezrodriguez structuralandtheoreticalevidenceofthedepletedprotonaffinityofthen3atominacyclovir AT inmaculadapereztoro structuralandtheoreticalevidenceofthedepletedprotonaffinityofthen3atominacyclovir AT antoniobauza structuralandtheoreticalevidenceofthedepletedprotonaffinityofthen3atominacyclovir AT antoniomatillahernandez structuralandtheoreticalevidenceofthedepletedprotonaffinityofthen3atominacyclovir |
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