Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir

The hydronium salt (H3O)2[Cu(N7–acv)2(H2O)2(SO4)2]·2H2O (1, acv = acyclovir) has been synthesized and characterized by single-crystal X-ray diffraction and spectral methods. Solvated Cu(OH)2 is a by-product of the synthesis. In the all-trans centrosymmetric complex anion, (a) the Cu(II) atom exhibit...

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Main Authors: Esther Vílchez-Rodríguez, Inmaculada Pérez-Toro, Antonio Bauzá, Antonio Matilla-Hernández
Format: Article
Language:English
Published: MDPI AG 2016-10-01
Series:Crystals
Subjects:
Online Access:http://www.mdpi.com/2073-4352/6/11/139
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spelling doaj-09bd0f8e0e404c8d9b97355cadb2d0912020-11-25T00:12:20ZengMDPI AGCrystals2073-43522016-10-0161113910.3390/cryst6110139cryst6110139Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in AcyclovirEsther Vílchez-Rodríguez0Inmaculada Pérez-Toro1Antonio Bauzá2Antonio Matilla-Hernández3Department of Inorganic Chemistry, Faculty of Pharmacy, University of Granada, 18071 Granada, SpainDepartment of Inorganic Chemistry, Faculty of Pharmacy, University of Granada, 18071 Granada, SpainDepartment of Chemistry, Faculty of Science, University of the Balearic Islands, Crta. de Valldemossa km 7.5, 07122 Palma de Mallorca (Baleares), SpainDepartment of Inorganic Chemistry, Faculty of Pharmacy, University of Granada, 18071 Granada, SpainThe hydronium salt (H3O)2[Cu(N7–acv)2(H2O)2(SO4)2]·2H2O (1, acv = acyclovir) has been synthesized and characterized by single-crystal X-ray diffraction and spectral methods. Solvated Cu(OH)2 is a by-product of the synthesis. In the all-trans centrosymmetric complex anion, (a) the Cu(II) atom exhibits an elongated octahedral coordination; (b) the metal-binding pattern of acyclovir (acv) consists of a Cu–N7(acv) bond plus an (aqua)O–H···O6(acv) interligand interaction; and (c) trans-apical/distal sites are occupied by monodentate O-sulfate donor anions. Neutral acyclovir and aqua-proximal ligands occupy the basal positions, stabilizing the metal binding pattern of acv. Each hydronium(1+) ion builds three H-bonds with O–sulfate, O6(acv), and O–alcohol(acv) from three neighboring complex anions. No O atoms of solvent water molecules are involved as acceptors. Theoretical calculations of molecular electrostatic potential surfaces and atomic charges also support that the O-alcohol of the N9(acv) side chain is a better H-acceptor than the N3 or the O-ether atoms of acv.http://www.mdpi.com/2073-4352/6/11/139copper(II)mixed-ligandhydroniumcrystal structureDFT calculationsinterligand interactions
collection DOAJ
language English
format Article
sources DOAJ
author Esther Vílchez-Rodríguez
Inmaculada Pérez-Toro
Antonio Bauzá
Antonio Matilla-Hernández
spellingShingle Esther Vílchez-Rodríguez
Inmaculada Pérez-Toro
Antonio Bauzá
Antonio Matilla-Hernández
Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir
Crystals
copper(II)
mixed-ligand
hydronium
crystal structure
DFT calculations
interligand interactions
author_facet Esther Vílchez-Rodríguez
Inmaculada Pérez-Toro
Antonio Bauzá
Antonio Matilla-Hernández
author_sort Esther Vílchez-Rodríguez
title Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir
title_short Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir
title_full Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir
title_fullStr Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir
title_full_unstemmed Structural and Theoretical Evidence of the Depleted Proton Affinity of the N3-Atom in Acyclovir
title_sort structural and theoretical evidence of the depleted proton affinity of the n3-atom in acyclovir
publisher MDPI AG
series Crystals
issn 2073-4352
publishDate 2016-10-01
description The hydronium salt (H3O)2[Cu(N7–acv)2(H2O)2(SO4)2]·2H2O (1, acv = acyclovir) has been synthesized and characterized by single-crystal X-ray diffraction and spectral methods. Solvated Cu(OH)2 is a by-product of the synthesis. In the all-trans centrosymmetric complex anion, (a) the Cu(II) atom exhibits an elongated octahedral coordination; (b) the metal-binding pattern of acyclovir (acv) consists of a Cu–N7(acv) bond plus an (aqua)O–H···O6(acv) interligand interaction; and (c) trans-apical/distal sites are occupied by monodentate O-sulfate donor anions. Neutral acyclovir and aqua-proximal ligands occupy the basal positions, stabilizing the metal binding pattern of acv. Each hydronium(1+) ion builds three H-bonds with O–sulfate, O6(acv), and O–alcohol(acv) from three neighboring complex anions. No O atoms of solvent water molecules are involved as acceptors. Theoretical calculations of molecular electrostatic potential surfaces and atomic charges also support that the O-alcohol of the N9(acv) side chain is a better H-acceptor than the N3 or the O-ether atoms of acv.
topic copper(II)
mixed-ligand
hydronium
crystal structure
DFT calculations
interligand interactions
url http://www.mdpi.com/2073-4352/6/11/139
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