Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic
The blue land crab Cardisoma guanhumi is widely distributed throughout tropical and subtropical estuarine regions in the Western Central Atlantic (WCA). Patterns of population genetic structure and historical demographics of the species were assessed by mtDNA control region sequence analysis to exam...
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doaj-0ac03909e463421c9274cb9829913a7b2020-11-24T22:01:19ZengMDPI AGMolecules1420-30492015-08-01208151581517410.3390/molecules200815158molecules200815158Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central AtlanticMaria Rosimere Xavier Amaral0Marc Albrecht1Alan Shane McKinley2Adriana Márcia Ferreira de Carvalho3Severino Cavalcante de Sousa4Fabio Mendonça Diniz5Molecular Biology & Biotechnology Laboratory, EMBRAPA Meio-Norte, CP 01, Teresina, PI 64049-550, BrazilDepartment of Biology, University of Nebraska at Kearney, Kearney, NE 68849, USANational Park Service, 18001 Old Cutler Bay Rd Suite 419, Palmetto Bay, FL 33190, USAMolecular Biology & Biotechnology Laboratory, EMBRAPA Meio-Norte, CP 01, Teresina, PI 64049-550, BrazilDepartment of Zootechny, Universidade Federal do Piauí, Bom Jesus, PI 64900-000, BrazilMolecular Biology & Biotechnology Laboratory, EMBRAPA Meio-Norte, CP 01, Teresina, PI 64049-550, BrazilThe blue land crab Cardisoma guanhumi is widely distributed throughout tropical and subtropical estuarine regions in the Western Central Atlantic (WCA). Patterns of population genetic structure and historical demographics of the species were assessed by mtDNA control region sequence analysis to examine the connectivity among five populations (n = 97) within the region for future conservation strategies and decision-making of fishery management. A total of 234 polymorphic nucleotides were revealed within the sequence region, which have defined 93 distinct haplotypes. No dominant mtDNA haplotypes were found but instead a distribution of a few low-frequency recurrent haplotypes with a large number of singletons. A NJ-tree and a median-joining haplotype network revealed two distinct clusters, corresponding to individuals from estuaries located along the Caribbean Sea and Brazilian waters, respectively. AMOVA and FST statistics supported the hypothesis that two main geographic regions exists. Phylogeographical discontinuity was further demonstrated by the Bayesian assignment analysis and a significant pattern of isolation-by-distance. Additionally, tests of neutral evolution and analysis of mismatch distribution indicate a complex demographic history in the WCA, which corresponds to bottleneck and subsequent population growth. Overall, a sharp genetic break between Caribbean and Brazilian populations raised concerns over the conservation status of the blue land crab.http://www.mdpi.com/1420-3049/20/8/15158population structurephylogeographybrachyuran crabssequencinggenetic diversitycontrol regionmtDNA |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Maria Rosimere Xavier Amaral Marc Albrecht Alan Shane McKinley Adriana Márcia Ferreira de Carvalho Severino Cavalcante de Sousa Fabio Mendonça Diniz |
spellingShingle |
Maria Rosimere Xavier Amaral Marc Albrecht Alan Shane McKinley Adriana Márcia Ferreira de Carvalho Severino Cavalcante de Sousa Fabio Mendonça Diniz Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic Molecules population structure phylogeography brachyuran crabs sequencing genetic diversity control region mtDNA |
author_facet |
Maria Rosimere Xavier Amaral Marc Albrecht Alan Shane McKinley Adriana Márcia Ferreira de Carvalho Severino Cavalcante de Sousa Fabio Mendonça Diniz |
author_sort |
Maria Rosimere Xavier Amaral |
title |
Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic |
title_short |
Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic |
title_full |
Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic |
title_fullStr |
Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic |
title_full_unstemmed |
Mitochondrial DNA Variation Reveals a Sharp Genetic Break within the Distribution of the Blue Land Crab Cardisoma guanhumi in the Western Central Atlantic |
title_sort |
mitochondrial dna variation reveals a sharp genetic break within the distribution of the blue land crab cardisoma guanhumi in the western central atlantic |
publisher |
MDPI AG |
series |
Molecules |
issn |
1420-3049 |
publishDate |
2015-08-01 |
description |
The blue land crab Cardisoma guanhumi is widely distributed throughout tropical and subtropical estuarine regions in the Western Central Atlantic (WCA). Patterns of population genetic structure and historical demographics of the species were assessed by mtDNA control region sequence analysis to examine the connectivity among five populations (n = 97) within the region for future conservation strategies and decision-making of fishery management. A total of 234 polymorphic nucleotides were revealed within the sequence region, which have defined 93 distinct haplotypes. No dominant mtDNA haplotypes were found but instead a distribution of a few low-frequency recurrent haplotypes with a large number of singletons. A NJ-tree and a median-joining haplotype network revealed two distinct clusters, corresponding to individuals from estuaries located along the Caribbean Sea and Brazilian waters, respectively. AMOVA and FST statistics supported the hypothesis that two main geographic regions exists. Phylogeographical discontinuity was further demonstrated by the Bayesian assignment analysis and a significant pattern of isolation-by-distance. Additionally, tests of neutral evolution and analysis of mismatch distribution indicate a complex demographic history in the WCA, which corresponds to bottleneck and subsequent population growth. Overall, a sharp genetic break between Caribbean and Brazilian populations raised concerns over the conservation status of the blue land crab. |
topic |
population structure phylogeography brachyuran crabs sequencing genetic diversity control region mtDNA |
url |
http://www.mdpi.com/1420-3049/20/8/15158 |
work_keys_str_mv |
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