Genome Sequence of Fusarium oxysporum f. sp. conglutinans, the Etiological Agent of Cabbage Fusarium Wilt
Fusarium oxysporum f. sp. conglutinans is the causal agent of Fusarium wilt of cabbage (Brassica oleracea var. capitata L.), which results in severe yield loss. Here, we report a high-quality genome sequence of a race 1 strain (IVC-1) of F. oxysporum f. sp. conglutinans, which was assembled using a...
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The American Phytopathological Society
2021-01-01
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Series: | Molecular Plant-Microbe Interactions |
Online Access: | https://doi.org/10.1094/MPMI-08-20-0245-A |
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doaj-0c09e307017541498c1e2890d7df20fe2021-05-24T19:19:58ZengThe American Phytopathological SocietyMolecular Plant-Microbe Interactions0894-02821943-77062021-01-0134221021310.1094/MPMI-08-20-0245-AGenome Sequence of Fusarium oxysporum f. sp. conglutinans, the Etiological Agent of Cabbage Fusarium WiltFangwei YuWei ZhangShenyun WangHong WangLi YuXiaoping ZengZhangjun FeiJianbin LiFusarium oxysporum f. sp. conglutinans is the causal agent of Fusarium wilt of cabbage (Brassica oleracea var. capitata L.), which results in severe yield loss. Here, we report a high-quality genome sequence of a race 1 strain (IVC-1) of F. oxysporum f. sp. conglutinans, which was assembled using a combination of PacBio long-read and Illumina short-read sequences. The assembled IVC-1 genome has a total size of 71.18 Mb, with a contig N50 length of 4.59 Mb, and encodes 23,374 predicted protein-coding genes. The high-quality genome of IVC-1 provides a valuable resource for facilitating our understanding of F. oxysporum f. sp. conglutinans–cabbage interaction.https://doi.org/10.1094/MPMI-08-20-0245-A |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Fangwei Yu Wei Zhang Shenyun Wang Hong Wang Li Yu Xiaoping Zeng Zhangjun Fei Jianbin Li |
spellingShingle |
Fangwei Yu Wei Zhang Shenyun Wang Hong Wang Li Yu Xiaoping Zeng Zhangjun Fei Jianbin Li Genome Sequence of Fusarium oxysporum f. sp. conglutinans, the Etiological Agent of Cabbage Fusarium Wilt Molecular Plant-Microbe Interactions |
author_facet |
Fangwei Yu Wei Zhang Shenyun Wang Hong Wang Li Yu Xiaoping Zeng Zhangjun Fei Jianbin Li |
author_sort |
Fangwei Yu |
title |
Genome Sequence of Fusarium oxysporum f. sp. conglutinans, the Etiological Agent of Cabbage Fusarium Wilt |
title_short |
Genome Sequence of Fusarium oxysporum f. sp. conglutinans, the Etiological Agent of Cabbage Fusarium Wilt |
title_full |
Genome Sequence of Fusarium oxysporum f. sp. conglutinans, the Etiological Agent of Cabbage Fusarium Wilt |
title_fullStr |
Genome Sequence of Fusarium oxysporum f. sp. conglutinans, the Etiological Agent of Cabbage Fusarium Wilt |
title_full_unstemmed |
Genome Sequence of Fusarium oxysporum f. sp. conglutinans, the Etiological Agent of Cabbage Fusarium Wilt |
title_sort |
genome sequence of fusarium oxysporum f. sp. conglutinans, the etiological agent of cabbage fusarium wilt |
publisher |
The American Phytopathological Society |
series |
Molecular Plant-Microbe Interactions |
issn |
0894-0282 1943-7706 |
publishDate |
2021-01-01 |
description |
Fusarium oxysporum f. sp. conglutinans is the causal agent of Fusarium wilt of cabbage (Brassica oleracea var. capitata L.), which results in severe yield loss. Here, we report a high-quality genome sequence of a race 1 strain (IVC-1) of F. oxysporum f. sp. conglutinans, which was assembled using a combination of PacBio long-read and Illumina short-read sequences. The assembled IVC-1 genome has a total size of 71.18 Mb, with a contig N50 length of 4.59 Mb, and encodes 23,374 predicted protein-coding genes. The high-quality genome of IVC-1 provides a valuable resource for facilitating our understanding of F. oxysporum f. sp. conglutinans–cabbage interaction. |
url |
https://doi.org/10.1094/MPMI-08-20-0245-A |
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