Serial crystallography on in vivo grown microcrystals using synchrotron radiation

Crystal structure determinations of biological macromolecules are limited by the availability of sufficiently sized crystals and by the fact that crystal quality deteriorates during data collection owing to radiation damage. Exploiting a micrometre-sized X-ray beam, high-precision diffractometry and...

Full description

Bibliographic Details
Main Authors: Cornelius Gati, Gleb Bourenkov, Marco Klinge, Dirk Rehders, Francesco Stellato, Dominik Oberthür, Oleksandr Yefanov, Benjamin P. Sommer, Stefan Mogk, Michael Duszenko, Christian Betzel, Thomas R. Schneider, Henry N. Chapman, Lars Redecke
Format: Article
Language:English
Published: International Union of Crystallography 2014-03-01
Series:IUCrJ
Subjects:
Online Access:http://scripts.iucr.org/cgi-bin/paper?S2052252513033939
id doaj-0c4ca93d0747431abbd8c4097dbb9b85
record_format Article
spelling doaj-0c4ca93d0747431abbd8c4097dbb9b852020-11-24T23:57:25ZengInternational Union of CrystallographyIUCrJ2052-25252014-03-0112879410.1107/S2052252513033939jt5002Serial crystallography on in vivo grown microcrystals using synchrotron radiationCornelius Gati0Gleb Bourenkov1Marco Klinge2Dirk Rehders3Francesco Stellato4Dominik Oberthür5Oleksandr Yefanov6Benjamin P. Sommer7Stefan Mogk8Michael Duszenko9Christian Betzel10Thomas R. Schneider11Henry N. Chapman12Lars Redecke13Center for Free-Electron Laser Science (CFEL), Deutsches Elektronensynchrotron (DESY), Notkestrasse 85, 22607 Hamburg, GermanyEuropean Molecular Biology Laboratory (EMBL), Hamburg Outstation, Notkestrasse 85, 22607 Hamburg, GermanyJoint Laboratory for Structural Biology of Infection and Inflammation, Institute of Biochemistry and Molecular Biology, University of Hamburg, and Institute of Biochemistry, University of Lübeck, Notkestrasse 85, 22607 Hamburg, GermanyJoint Laboratory for Structural Biology of Infection and Inflammation, Institute of Biochemistry and Molecular Biology, University of Hamburg, and Institute of Biochemistry, University of Lübeck, Notkestrasse 85, 22607 Hamburg, GermanyCenter for Free-Electron Laser Science (CFEL), Deutsches Elektronensynchrotron (DESY), Notkestrasse 85, 22607 Hamburg, GermanyCenter for Free-Electron Laser Science (CFEL), Deutsches Elektronensynchrotron (DESY), Notkestrasse 85, 22607 Hamburg, GermanyCenter for Free-Electron Laser Science (CFEL), Deutsches Elektronensynchrotron (DESY), Notkestrasse 85, 22607 Hamburg, GermanyInstitute of Biochemistry and Molecular Biology, University of Hamburg, Notkestrasse 85, 22607 Hamburg, GermanyInterfaculty Institute of Biochemistry, University of Tübingen, Hoppe-Seyler-Strasse 4, 72076 Tübingen, GermanyInterfaculty Institute of Biochemistry, University of Tübingen, Hoppe-Seyler-Strasse 4, 72076 Tübingen, GermanyInstitute of Biochemistry and Molecular Biology, University of Hamburg, Notkestrasse 85, 22607 Hamburg, GermanyEuropean Molecular Biology Laboratory (EMBL), Hamburg Outstation, Notkestrasse 85, 22607 Hamburg, GermanyCenter for Free-Electron Laser Science (CFEL), Deutsches Elektronensynchrotron (DESY), Notkestrasse 85, 22607 Hamburg, GermanyJoint Laboratory for Structural Biology of Infection and Inflammation, Institute of Biochemistry and Molecular Biology, University of Hamburg, and Institute of Biochemistry, University of Lübeck, Notkestrasse 85, 22607 Hamburg, GermanyCrystal structure determinations of biological macromolecules are limited by the availability of sufficiently sized crystals and by the fact that crystal quality deteriorates during data collection owing to radiation damage. Exploiting a micrometre-sized X-ray beam, high-precision diffractometry and shutterless data acquisition with a pixel-array detector, a strategy for collecting data from many micrometre-sized crystals presented to an X-ray beam in a vitrified suspension is demonstrated. By combining diffraction data from 80 Trypanosoma brucei procathepsin B crystals with an average volume of 9 µm3, a complete data set to 3.0 Å resolution has been assembled. The data allowed the refinement of a structural model that is consistent with that previously obtained using free-electron laser radiation, providing mutual validation. Further improvements of the serial synchrotron crystallography technique and its combination with serial femtosecond crystallography are discussed that may allow the determination of high-resolution structures of micrometre-sized crystals.http://scripts.iucr.org/cgi-bin/paper?S2052252513033939protein microcrystallographyserial crystallographyin vivo grown microcrystals
collection DOAJ
language English
format Article
sources DOAJ
author Cornelius Gati
Gleb Bourenkov
Marco Klinge
Dirk Rehders
Francesco Stellato
Dominik Oberthür
Oleksandr Yefanov
Benjamin P. Sommer
Stefan Mogk
Michael Duszenko
Christian Betzel
Thomas R. Schneider
Henry N. Chapman
Lars Redecke
spellingShingle Cornelius Gati
Gleb Bourenkov
Marco Klinge
Dirk Rehders
Francesco Stellato
Dominik Oberthür
Oleksandr Yefanov
Benjamin P. Sommer
Stefan Mogk
Michael Duszenko
Christian Betzel
Thomas R. Schneider
Henry N. Chapman
Lars Redecke
Serial crystallography on in vivo grown microcrystals using synchrotron radiation
IUCrJ
protein microcrystallography
serial crystallography
in vivo grown microcrystals
author_facet Cornelius Gati
Gleb Bourenkov
Marco Klinge
Dirk Rehders
Francesco Stellato
Dominik Oberthür
Oleksandr Yefanov
Benjamin P. Sommer
Stefan Mogk
Michael Duszenko
Christian Betzel
Thomas R. Schneider
Henry N. Chapman
Lars Redecke
author_sort Cornelius Gati
title Serial crystallography on in vivo grown microcrystals using synchrotron radiation
title_short Serial crystallography on in vivo grown microcrystals using synchrotron radiation
title_full Serial crystallography on in vivo grown microcrystals using synchrotron radiation
title_fullStr Serial crystallography on in vivo grown microcrystals using synchrotron radiation
title_full_unstemmed Serial crystallography on in vivo grown microcrystals using synchrotron radiation
title_sort serial crystallography on in vivo grown microcrystals using synchrotron radiation
publisher International Union of Crystallography
series IUCrJ
issn 2052-2525
publishDate 2014-03-01
description Crystal structure determinations of biological macromolecules are limited by the availability of sufficiently sized crystals and by the fact that crystal quality deteriorates during data collection owing to radiation damage. Exploiting a micrometre-sized X-ray beam, high-precision diffractometry and shutterless data acquisition with a pixel-array detector, a strategy for collecting data from many micrometre-sized crystals presented to an X-ray beam in a vitrified suspension is demonstrated. By combining diffraction data from 80 Trypanosoma brucei procathepsin B crystals with an average volume of 9 µm3, a complete data set to 3.0 Å resolution has been assembled. The data allowed the refinement of a structural model that is consistent with that previously obtained using free-electron laser radiation, providing mutual validation. Further improvements of the serial synchrotron crystallography technique and its combination with serial femtosecond crystallography are discussed that may allow the determination of high-resolution structures of micrometre-sized crystals.
topic protein microcrystallography
serial crystallography
in vivo grown microcrystals
url http://scripts.iucr.org/cgi-bin/paper?S2052252513033939
work_keys_str_mv AT corneliusgati serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT glebbourenkov serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT marcoklinge serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT dirkrehders serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT francescostellato serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT dominikoberthur serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT oleksandryefanov serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT benjaminpsommer serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT stefanmogk serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT michaelduszenko serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT christianbetzel serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT thomasrschneider serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT henrynchapman serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
AT larsredecke serialcrystallographyoninvivogrownmicrocrystalsusingsynchrotronradiation
_version_ 1725454024420884480