Data on RNA-seq analysis of Garcinia mangostana L. seed development

Mangosteen (Garcinia mangostana L.) has exceptional potential for commercial and pharmaceutical applications due to its delicious fruit and medicinal properties. Nevertheless, the molecular mechanism of mangosteen seed development is poorly understood. In this study, we performed transcriptomic anal...

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Main Authors: Othman Mazlan, Azhani Abdul-Rahman, Hoe-Han Goh, Wan Mohd Aizat, Normah Mohd Noor
Format: Article
Language:English
Published: Elsevier 2018-02-01
Series:Data in Brief
Online Access:http://www.sciencedirect.com/science/article/pii/S2352340917305978
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spelling doaj-0ce204d74647439daae8822ab2d5d0772020-11-25T02:47:28ZengElsevierData in Brief2352-34092018-02-01169093Data on RNA-seq analysis of Garcinia mangostana L. seed developmentOthman Mazlan0Azhani Abdul-Rahman1Hoe-Han Goh2Wan Mohd Aizat3Normah Mohd Noor4Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 Bangi, Selangor, MalaysiaInstitute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 Bangi, Selangor, MalaysiaInstitute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 Bangi, Selangor, MalaysiaInstitute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 Bangi, Selangor, MalaysiaCorresponding author.; Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 Bangi, Selangor, MalaysiaMangosteen (Garcinia mangostana L.) has exceptional potential for commercial and pharmaceutical applications due to its delicious fruit and medicinal properties. Nevertheless, the molecular mechanism of mangosteen seed development is poorly understood. In this study, we performed transcriptomic analysis of four seed developmental stages; eight, ten, twelve and fourteen weeks after anthesis. Illumina HiSeq™ 4000 sequencer was used to generate raw data of approximately 68 Gb in size. From 451,495,326 raw reads, 406,143,756 clean reads were obtained. The raw data were uploaded to SRA database and the BioProject ID is PRJNA395504. These data provide the basis for further exploration and understanding of the molecular mechanism in mangosteen seed development. Keywords: Mangosteen fruit, Seed development, Transcriptomics, RNA sequencinghttp://www.sciencedirect.com/science/article/pii/S2352340917305978
collection DOAJ
language English
format Article
sources DOAJ
author Othman Mazlan
Azhani Abdul-Rahman
Hoe-Han Goh
Wan Mohd Aizat
Normah Mohd Noor
spellingShingle Othman Mazlan
Azhani Abdul-Rahman
Hoe-Han Goh
Wan Mohd Aizat
Normah Mohd Noor
Data on RNA-seq analysis of Garcinia mangostana L. seed development
Data in Brief
author_facet Othman Mazlan
Azhani Abdul-Rahman
Hoe-Han Goh
Wan Mohd Aizat
Normah Mohd Noor
author_sort Othman Mazlan
title Data on RNA-seq analysis of Garcinia mangostana L. seed development
title_short Data on RNA-seq analysis of Garcinia mangostana L. seed development
title_full Data on RNA-seq analysis of Garcinia mangostana L. seed development
title_fullStr Data on RNA-seq analysis of Garcinia mangostana L. seed development
title_full_unstemmed Data on RNA-seq analysis of Garcinia mangostana L. seed development
title_sort data on rna-seq analysis of garcinia mangostana l. seed development
publisher Elsevier
series Data in Brief
issn 2352-3409
publishDate 2018-02-01
description Mangosteen (Garcinia mangostana L.) has exceptional potential for commercial and pharmaceutical applications due to its delicious fruit and medicinal properties. Nevertheless, the molecular mechanism of mangosteen seed development is poorly understood. In this study, we performed transcriptomic analysis of four seed developmental stages; eight, ten, twelve and fourteen weeks after anthesis. Illumina HiSeq™ 4000 sequencer was used to generate raw data of approximately 68 Gb in size. From 451,495,326 raw reads, 406,143,756 clean reads were obtained. The raw data were uploaded to SRA database and the BioProject ID is PRJNA395504. These data provide the basis for further exploration and understanding of the molecular mechanism in mangosteen seed development. Keywords: Mangosteen fruit, Seed development, Transcriptomics, RNA sequencing
url http://www.sciencedirect.com/science/article/pii/S2352340917305978
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