Data on RNA-seq analysis of Garcinia mangostana L. seed development
Mangosteen (Garcinia mangostana L.) has exceptional potential for commercial and pharmaceutical applications due to its delicious fruit and medicinal properties. Nevertheless, the molecular mechanism of mangosteen seed development is poorly understood. In this study, we performed transcriptomic anal...
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doaj-0ce204d74647439daae8822ab2d5d0772020-11-25T02:47:28ZengElsevierData in Brief2352-34092018-02-01169093Data on RNA-seq analysis of Garcinia mangostana L. seed developmentOthman Mazlan0Azhani Abdul-Rahman1Hoe-Han Goh2Wan Mohd Aizat3Normah Mohd Noor4Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 Bangi, Selangor, MalaysiaInstitute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 Bangi, Selangor, MalaysiaInstitute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 Bangi, Selangor, MalaysiaInstitute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 Bangi, Selangor, MalaysiaCorresponding author.; Institute of Systems Biology (INBIOSIS), Universiti Kebangsaan Malaysia (UKM), 43600 Bangi, Selangor, MalaysiaMangosteen (Garcinia mangostana L.) has exceptional potential for commercial and pharmaceutical applications due to its delicious fruit and medicinal properties. Nevertheless, the molecular mechanism of mangosteen seed development is poorly understood. In this study, we performed transcriptomic analysis of four seed developmental stages; eight, ten, twelve and fourteen weeks after anthesis. Illumina HiSeq™ 4000 sequencer was used to generate raw data of approximately 68 Gb in size. From 451,495,326 raw reads, 406,143,756 clean reads were obtained. The raw data were uploaded to SRA database and the BioProject ID is PRJNA395504. These data provide the basis for further exploration and understanding of the molecular mechanism in mangosteen seed development. Keywords: Mangosteen fruit, Seed development, Transcriptomics, RNA sequencinghttp://www.sciencedirect.com/science/article/pii/S2352340917305978 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Othman Mazlan Azhani Abdul-Rahman Hoe-Han Goh Wan Mohd Aizat Normah Mohd Noor |
spellingShingle |
Othman Mazlan Azhani Abdul-Rahman Hoe-Han Goh Wan Mohd Aizat Normah Mohd Noor Data on RNA-seq analysis of Garcinia mangostana L. seed development Data in Brief |
author_facet |
Othman Mazlan Azhani Abdul-Rahman Hoe-Han Goh Wan Mohd Aizat Normah Mohd Noor |
author_sort |
Othman Mazlan |
title |
Data on RNA-seq analysis of Garcinia mangostana L. seed development |
title_short |
Data on RNA-seq analysis of Garcinia mangostana L. seed development |
title_full |
Data on RNA-seq analysis of Garcinia mangostana L. seed development |
title_fullStr |
Data on RNA-seq analysis of Garcinia mangostana L. seed development |
title_full_unstemmed |
Data on RNA-seq analysis of Garcinia mangostana L. seed development |
title_sort |
data on rna-seq analysis of garcinia mangostana l. seed development |
publisher |
Elsevier |
series |
Data in Brief |
issn |
2352-3409 |
publishDate |
2018-02-01 |
description |
Mangosteen (Garcinia mangostana L.) has exceptional potential for commercial and pharmaceutical applications due to its delicious fruit and medicinal properties. Nevertheless, the molecular mechanism of mangosteen seed development is poorly understood. In this study, we performed transcriptomic analysis of four seed developmental stages; eight, ten, twelve and fourteen weeks after anthesis. Illumina HiSeq™ 4000 sequencer was used to generate raw data of approximately 68 Gb in size. From 451,495,326 raw reads, 406,143,756 clean reads were obtained. The raw data were uploaded to SRA database and the BioProject ID is PRJNA395504. These data provide the basis for further exploration and understanding of the molecular mechanism in mangosteen seed development. Keywords: Mangosteen fruit, Seed development, Transcriptomics, RNA sequencing |
url |
http://www.sciencedirect.com/science/article/pii/S2352340917305978 |
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