Functional Analysis of Maize Silk-Specific ZmbZIP25 Promoter

ZmbZIP25 (Zea mays bZIP (basic leucine zipper) transcription factor 25) is a function-unknown protein that belongs to the D group of the bZIP transcription factor family. RNA-seq data showed that the expression of ZmbZIP25 was tissue-specific in maize silks, and this specificity was confirmed by RT-...

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Main Authors: Wanying Li, Dan Yu, Jingjuan Yu, Dengyun Zhu, Qian Zhao
Format: Article
Language:English
Published: MDPI AG 2018-03-01
Series:International Journal of Molecular Sciences
Subjects:
Online Access:http://www.mdpi.com/1422-0067/19/3/822
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spelling doaj-0d77b7aa3a284015920014a297e7af9e2020-11-25T01:28:28ZengMDPI AGInternational Journal of Molecular Sciences1422-00672018-03-0119382210.3390/ijms19030822ijms19030822Functional Analysis of Maize Silk-Specific ZmbZIP25 PromoterWanying Li0Dan Yu1Jingjuan Yu2Dengyun Zhu3Qian Zhao4State Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, ChinaState Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, ChinaState Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, ChinaState Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, ChinaState Key Laboratory of Agrobiotechnology, College of Biological Sciences, China Agricultural University, No. 2 Yuanmingyuan West Road, Haidian District, Beijing 100193, ChinaZmbZIP25 (Zea mays bZIP (basic leucine zipper) transcription factor 25) is a function-unknown protein that belongs to the D group of the bZIP transcription factor family. RNA-seq data showed that the expression of ZmbZIP25 was tissue-specific in maize silks, and this specificity was confirmed by RT-PCR (reverse transcription-polymerase chain reaction). In situ RNA hybridization showed that ZmbZIP25 was expressed exclusively in the xylem of maize silks. A 5′ RACE (rapid amplification of cDNA ends) assay identified an adenine residue as the transcription start site of the ZmbZIP25 gene. To characterize this silk-specific promoter, we isolated and analyzed a 2450 bp (from −2083 to +367) and a 2600 bp sequence of ZmbZIP25 (from −2083 to +517, the transcription start site was denoted +1). Stable expression assays in Arabidopsis showed that the expression of the reporter gene GUS driven by the 2450 bp ZmbZIP25 5′-flanking fragment occurred exclusively in the papillae of Arabidopsis stigmas. Furthermore, transient expression assays in maize indicated that GUS and GFP expression driven by the 2450 bp ZmbZIP25 5′-flanking sequences occurred only in maize silks and not in other tissues. However, no GUS or GFP expression was driven by the 2600 bp ZmbZIP25 5′-flanking sequences in either stable or transient expression assays. A series of deletion analyses of the 2450 bp ZmbZIP25 5′-flanking sequence was performed in transgenic Arabidopsis plants, and probable elements prediction analysis revealed the possible presence of negative regulatory elements within the 161 bp region from −1117 to −957 that were responsible for the specificity of the ZmbZIP25 5′-flanking sequence.http://www.mdpi.com/1422-0067/19/3/822bZIP transcription factorintronmaizesilk specificity5′-flanking sequence
collection DOAJ
language English
format Article
sources DOAJ
author Wanying Li
Dan Yu
Jingjuan Yu
Dengyun Zhu
Qian Zhao
spellingShingle Wanying Li
Dan Yu
Jingjuan Yu
Dengyun Zhu
Qian Zhao
Functional Analysis of Maize Silk-Specific ZmbZIP25 Promoter
International Journal of Molecular Sciences
bZIP transcription factor
intron
maize
silk specificity
5′-flanking sequence
author_facet Wanying Li
Dan Yu
Jingjuan Yu
Dengyun Zhu
Qian Zhao
author_sort Wanying Li
title Functional Analysis of Maize Silk-Specific ZmbZIP25 Promoter
title_short Functional Analysis of Maize Silk-Specific ZmbZIP25 Promoter
title_full Functional Analysis of Maize Silk-Specific ZmbZIP25 Promoter
title_fullStr Functional Analysis of Maize Silk-Specific ZmbZIP25 Promoter
title_full_unstemmed Functional Analysis of Maize Silk-Specific ZmbZIP25 Promoter
title_sort functional analysis of maize silk-specific zmbzip25 promoter
publisher MDPI AG
series International Journal of Molecular Sciences
issn 1422-0067
publishDate 2018-03-01
description ZmbZIP25 (Zea mays bZIP (basic leucine zipper) transcription factor 25) is a function-unknown protein that belongs to the D group of the bZIP transcription factor family. RNA-seq data showed that the expression of ZmbZIP25 was tissue-specific in maize silks, and this specificity was confirmed by RT-PCR (reverse transcription-polymerase chain reaction). In situ RNA hybridization showed that ZmbZIP25 was expressed exclusively in the xylem of maize silks. A 5′ RACE (rapid amplification of cDNA ends) assay identified an adenine residue as the transcription start site of the ZmbZIP25 gene. To characterize this silk-specific promoter, we isolated and analyzed a 2450 bp (from −2083 to +367) and a 2600 bp sequence of ZmbZIP25 (from −2083 to +517, the transcription start site was denoted +1). Stable expression assays in Arabidopsis showed that the expression of the reporter gene GUS driven by the 2450 bp ZmbZIP25 5′-flanking fragment occurred exclusively in the papillae of Arabidopsis stigmas. Furthermore, transient expression assays in maize indicated that GUS and GFP expression driven by the 2450 bp ZmbZIP25 5′-flanking sequences occurred only in maize silks and not in other tissues. However, no GUS or GFP expression was driven by the 2600 bp ZmbZIP25 5′-flanking sequences in either stable or transient expression assays. A series of deletion analyses of the 2450 bp ZmbZIP25 5′-flanking sequence was performed in transgenic Arabidopsis plants, and probable elements prediction analysis revealed the possible presence of negative regulatory elements within the 161 bp region from −1117 to −957 that were responsible for the specificity of the ZmbZIP25 5′-flanking sequence.
topic bZIP transcription factor
intron
maize
silk specificity
5′-flanking sequence
url http://www.mdpi.com/1422-0067/19/3/822
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AT jingjuanyu functionalanalysisofmaizesilkspecificzmbzip25promoter
AT dengyunzhu functionalanalysisofmaizesilkspecificzmbzip25promoter
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