A systems-based mathematical modelling framework for investigating the effect of drugs on solid tumours

<p>Abstract</p> <p>Background</p> <p>Elucidating the effects of drugs on solid tumours is a highly challenging multi-level problem, since this involves many complexities associated with transport and cellular response, which in turn is characterized by highly non-linear...

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Main Authors: Liu Cong, Krishnan J, Xu Xiao
Format: Article
Language:English
Published: BMC 2011-12-01
Series:Theoretical Biology and Medical Modelling
Subjects:
Online Access:http://www.tbiomed.com/content/8/1/45
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spelling doaj-0e3eb848dd5243bba2107591d9d3170f2020-11-25T00:29:56ZengBMCTheoretical Biology and Medical Modelling1742-46822011-12-01814510.1186/1742-4682-8-45A systems-based mathematical modelling framework for investigating the effect of drugs on solid tumoursLiu CongKrishnan JXu Xiao<p>Abstract</p> <p>Background</p> <p>Elucidating the effects of drugs on solid tumours is a highly challenging multi-level problem, since this involves many complexities associated with transport and cellular response, which in turn is characterized by highly non-linear chemical signal transduction. Appropriate systems frameworks are needed to seriously address the sources of these complexities, especially from the cellular side.</p> <p>Results</p> <p>We develop a skeletal modelling framework incorporating interstitial drug transport, intracellular signal processing and cell population descriptions. The descriptions aim to appropriately capture the nature of information flow. The model is deliberately formulated to start with simple intracellular descriptions so that additional features can be incorporated in a modular fashion. Two kinds of intracellular signalling modules which describe the drug effect were considered, one a monostable switch and the other a bistable switch. Analysis of our model revealed how different drug stimuli can lead to cell killing in the tumour. Interestingly both modules considered exhibited similar trends. The effects of important parameters were also studied.</p> <p>Conclusions</p> <p>We have created a predictive systems platform integrating drug transport and cellular response which can be systematically augmented to include additional layers of cellular complexity. Our results indicate that intracellular signalling models which are qualitatively different can give rise to similar behaviour to simple (and typical) stimuli, and that validating intracellular descriptions must be performed with care by considering a variety of drug stimuli.</p> http://www.tbiomed.com/content/8/1/45Solid tumourdrug effecttransportintracellular signallingsystems approachmodelling frameworkbottom-up approach.
collection DOAJ
language English
format Article
sources DOAJ
author Liu Cong
Krishnan J
Xu Xiao
spellingShingle Liu Cong
Krishnan J
Xu Xiao
A systems-based mathematical modelling framework for investigating the effect of drugs on solid tumours
Theoretical Biology and Medical Modelling
Solid tumour
drug effect
transport
intracellular signalling
systems approach
modelling framework
bottom-up approach.
author_facet Liu Cong
Krishnan J
Xu Xiao
author_sort Liu Cong
title A systems-based mathematical modelling framework for investigating the effect of drugs on solid tumours
title_short A systems-based mathematical modelling framework for investigating the effect of drugs on solid tumours
title_full A systems-based mathematical modelling framework for investigating the effect of drugs on solid tumours
title_fullStr A systems-based mathematical modelling framework for investigating the effect of drugs on solid tumours
title_full_unstemmed A systems-based mathematical modelling framework for investigating the effect of drugs on solid tumours
title_sort systems-based mathematical modelling framework for investigating the effect of drugs on solid tumours
publisher BMC
series Theoretical Biology and Medical Modelling
issn 1742-4682
publishDate 2011-12-01
description <p>Abstract</p> <p>Background</p> <p>Elucidating the effects of drugs on solid tumours is a highly challenging multi-level problem, since this involves many complexities associated with transport and cellular response, which in turn is characterized by highly non-linear chemical signal transduction. Appropriate systems frameworks are needed to seriously address the sources of these complexities, especially from the cellular side.</p> <p>Results</p> <p>We develop a skeletal modelling framework incorporating interstitial drug transport, intracellular signal processing and cell population descriptions. The descriptions aim to appropriately capture the nature of information flow. The model is deliberately formulated to start with simple intracellular descriptions so that additional features can be incorporated in a modular fashion. Two kinds of intracellular signalling modules which describe the drug effect were considered, one a monostable switch and the other a bistable switch. Analysis of our model revealed how different drug stimuli can lead to cell killing in the tumour. Interestingly both modules considered exhibited similar trends. The effects of important parameters were also studied.</p> <p>Conclusions</p> <p>We have created a predictive systems platform integrating drug transport and cellular response which can be systematically augmented to include additional layers of cellular complexity. Our results indicate that intracellular signalling models which are qualitatively different can give rise to similar behaviour to simple (and typical) stimuli, and that validating intracellular descriptions must be performed with care by considering a variety of drug stimuli.</p>
topic Solid tumour
drug effect
transport
intracellular signalling
systems approach
modelling framework
bottom-up approach.
url http://www.tbiomed.com/content/8/1/45
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