Abortive and propagating intracellular calcium waves: analysis from a hybrid model.

The functional properties of inositol(1,4,5)-triphosphate (IP3) receptors allow a variety of intracellular Ca(2+) phenomena. In this way, global phenomena, such as propagating and abortive Ca(2+) waves, as well as local events such as puffs, have been observed. Several experimental studies suggest t...

Full description

Bibliographic Details
Main Authors: Nara Guisoni, Paola Ferrero, Carla Layana, Luis Diambra
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2015-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC4300085?pdf=render
id doaj-12fc0c6fdf0f4de2b0b6cc7cae181e93
record_format Article
spelling doaj-12fc0c6fdf0f4de2b0b6cc7cae181e932020-11-25T01:33:17ZengPublic Library of Science (PLoS)PLoS ONE1932-62032015-01-01101e011518710.1371/journal.pone.0115187Abortive and propagating intracellular calcium waves: analysis from a hybrid model.Nara GuisoniPaola FerreroCarla LayanaLuis DiambraThe functional properties of inositol(1,4,5)-triphosphate (IP3) receptors allow a variety of intracellular Ca(2+) phenomena. In this way, global phenomena, such as propagating and abortive Ca(2+) waves, as well as local events such as puffs, have been observed. Several experimental studies suggest that many features of global phenomena (e.g., frequency, amplitude, speed wave) depend on the interplay of biophysical processes such as diffusion, buffering, efflux and influx rates, which in turn depend on parameters such as buffer concentration, Ca(2+) pump density, cytosolic IP3 level, and intercluster distance. Besides, it is known that cells are able to modify some of these parameters in order to regulate the Ca(2+) signaling. By using a hybrid model, we analyzed different features of the hierarchy of calcium events as a function of two relevant parameters for the calcium signaling, the intercluster distance and the pump strength or intensity. In the space spanned by these two parameters, we found two modes of calcium dynamics, one dominated by abortive calcium waves and the other by propagating waves. Smaller distances between the release sites promote propagating calcium waves, while the increase of the efflux rate makes the transition from propagating to abortive waves occur at lower values of intercluster distance. We determined the frontier between these two modes, in the parameter space defined by the intercluster distance and the pump strength. Furthermore, we found that the velocity of simulated calcium waves accomplishes Luther's law, and that an effective rate constant for autocatalytic calcium production decays linearly with both the intercluster distance and the pump strength.http://europepmc.org/articles/PMC4300085?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Nara Guisoni
Paola Ferrero
Carla Layana
Luis Diambra
spellingShingle Nara Guisoni
Paola Ferrero
Carla Layana
Luis Diambra
Abortive and propagating intracellular calcium waves: analysis from a hybrid model.
PLoS ONE
author_facet Nara Guisoni
Paola Ferrero
Carla Layana
Luis Diambra
author_sort Nara Guisoni
title Abortive and propagating intracellular calcium waves: analysis from a hybrid model.
title_short Abortive and propagating intracellular calcium waves: analysis from a hybrid model.
title_full Abortive and propagating intracellular calcium waves: analysis from a hybrid model.
title_fullStr Abortive and propagating intracellular calcium waves: analysis from a hybrid model.
title_full_unstemmed Abortive and propagating intracellular calcium waves: analysis from a hybrid model.
title_sort abortive and propagating intracellular calcium waves: analysis from a hybrid model.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2015-01-01
description The functional properties of inositol(1,4,5)-triphosphate (IP3) receptors allow a variety of intracellular Ca(2+) phenomena. In this way, global phenomena, such as propagating and abortive Ca(2+) waves, as well as local events such as puffs, have been observed. Several experimental studies suggest that many features of global phenomena (e.g., frequency, amplitude, speed wave) depend on the interplay of biophysical processes such as diffusion, buffering, efflux and influx rates, which in turn depend on parameters such as buffer concentration, Ca(2+) pump density, cytosolic IP3 level, and intercluster distance. Besides, it is known that cells are able to modify some of these parameters in order to regulate the Ca(2+) signaling. By using a hybrid model, we analyzed different features of the hierarchy of calcium events as a function of two relevant parameters for the calcium signaling, the intercluster distance and the pump strength or intensity. In the space spanned by these two parameters, we found two modes of calcium dynamics, one dominated by abortive calcium waves and the other by propagating waves. Smaller distances between the release sites promote propagating calcium waves, while the increase of the efflux rate makes the transition from propagating to abortive waves occur at lower values of intercluster distance. We determined the frontier between these two modes, in the parameter space defined by the intercluster distance and the pump strength. Furthermore, we found that the velocity of simulated calcium waves accomplishes Luther's law, and that an effective rate constant for autocatalytic calcium production decays linearly with both the intercluster distance and the pump strength.
url http://europepmc.org/articles/PMC4300085?pdf=render
work_keys_str_mv AT naraguisoni abortiveandpropagatingintracellularcalciumwavesanalysisfromahybridmodel
AT paolaferrero abortiveandpropagatingintracellularcalciumwavesanalysisfromahybridmodel
AT carlalayana abortiveandpropagatingintracellularcalciumwavesanalysisfromahybridmodel
AT luisdiambra abortiveandpropagatingintracellularcalciumwavesanalysisfromahybridmodel
_version_ 1725078223867346944