Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs.

This study employed deep-learning convolutional neural networks to stage lung disease severity of Coronavirus Disease 2019 (COVID-19) infection on portable chest x-ray (CXR) with radiologist score of disease severity as ground truth. This study consisted of 131 portable CXR from 84 COVID-19 patients...

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Main Authors: Jocelyn Zhu, Beiyi Shen, Almas Abbasi, Mahsa Hoshmand-Kochi, Haifang Li, Tim Q Duong
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2020-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0236621
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spelling doaj-1300bc95006547c192d320a9197a54fc2021-03-04T11:54:21ZengPublic Library of Science (PLoS)PLoS ONE1932-62032020-01-01157e023662110.1371/journal.pone.0236621Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs.Jocelyn ZhuBeiyi ShenAlmas AbbasiMahsa Hoshmand-KochiHaifang LiTim Q DuongThis study employed deep-learning convolutional neural networks to stage lung disease severity of Coronavirus Disease 2019 (COVID-19) infection on portable chest x-ray (CXR) with radiologist score of disease severity as ground truth. This study consisted of 131 portable CXR from 84 COVID-19 patients (51M 55.1±14.9yo; 29F 60.1±14.3yo; 4 missing information). Three expert chest radiologists scored the left and right lung separately based on the degree of opacity (0-3) and geographic extent (0-4). Deep-learning convolutional neural network (CNN) was used to predict lung disease severity scores. Data were split into 80% training and 20% testing datasets. Correlation analysis between AI-predicted versus radiologist scores were analyzed. Comparison was made with traditional and transfer learning. The average opacity score was 2.52 (range: 0-6) with a standard deviation of 0.25 (9.9%) across three readers. The average geographic extent score was 3.42 (range: 0-8) with a standard deviation of 0.57 (16.7%) across three readers. The inter-rater agreement yielded a Fleiss' Kappa of 0.45 for opacity score and 0.71 for extent score. AI-predicted scores strongly correlated with radiologist scores, with the top model yielding a correlation coefficient (R2) of 0.90 (range: 0.73-0.90 for traditional learning and 0.83-0.90 for transfer learning) and a mean absolute error of 8.5% (ranges: 17.2-21.0% and 8.5%-15.5, respectively). Transfer learning generally performed better. In conclusion, deep-learning CNN accurately stages disease severity on portable chest x-ray of COVID-19 lung infection. This approach may prove useful to stage lung disease severity, prognosticate, and predict treatment response and survival, thereby informing risk management and resource allocation.https://doi.org/10.1371/journal.pone.0236621
collection DOAJ
language English
format Article
sources DOAJ
author Jocelyn Zhu
Beiyi Shen
Almas Abbasi
Mahsa Hoshmand-Kochi
Haifang Li
Tim Q Duong
spellingShingle Jocelyn Zhu
Beiyi Shen
Almas Abbasi
Mahsa Hoshmand-Kochi
Haifang Li
Tim Q Duong
Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs.
PLoS ONE
author_facet Jocelyn Zhu
Beiyi Shen
Almas Abbasi
Mahsa Hoshmand-Kochi
Haifang Li
Tim Q Duong
author_sort Jocelyn Zhu
title Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs.
title_short Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs.
title_full Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs.
title_fullStr Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs.
title_full_unstemmed Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs.
title_sort deep transfer learning artificial intelligence accurately stages covid-19 lung disease severity on portable chest radiographs.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2020-01-01
description This study employed deep-learning convolutional neural networks to stage lung disease severity of Coronavirus Disease 2019 (COVID-19) infection on portable chest x-ray (CXR) with radiologist score of disease severity as ground truth. This study consisted of 131 portable CXR from 84 COVID-19 patients (51M 55.1±14.9yo; 29F 60.1±14.3yo; 4 missing information). Three expert chest radiologists scored the left and right lung separately based on the degree of opacity (0-3) and geographic extent (0-4). Deep-learning convolutional neural network (CNN) was used to predict lung disease severity scores. Data were split into 80% training and 20% testing datasets. Correlation analysis between AI-predicted versus radiologist scores were analyzed. Comparison was made with traditional and transfer learning. The average opacity score was 2.52 (range: 0-6) with a standard deviation of 0.25 (9.9%) across three readers. The average geographic extent score was 3.42 (range: 0-8) with a standard deviation of 0.57 (16.7%) across three readers. The inter-rater agreement yielded a Fleiss' Kappa of 0.45 for opacity score and 0.71 for extent score. AI-predicted scores strongly correlated with radiologist scores, with the top model yielding a correlation coefficient (R2) of 0.90 (range: 0.73-0.90 for traditional learning and 0.83-0.90 for transfer learning) and a mean absolute error of 8.5% (ranges: 17.2-21.0% and 8.5%-15.5, respectively). Transfer learning generally performed better. In conclusion, deep-learning CNN accurately stages disease severity on portable chest x-ray of COVID-19 lung infection. This approach may prove useful to stage lung disease severity, prognosticate, and predict treatment response and survival, thereby informing risk management and resource allocation.
url https://doi.org/10.1371/journal.pone.0236621
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