Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs.
This study employed deep-learning convolutional neural networks to stage lung disease severity of Coronavirus Disease 2019 (COVID-19) infection on portable chest x-ray (CXR) with radiologist score of disease severity as ground truth. This study consisted of 131 portable CXR from 84 COVID-19 patients...
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2020-01-01
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doaj-1300bc95006547c192d320a9197a54fc2021-03-04T11:54:21ZengPublic Library of Science (PLoS)PLoS ONE1932-62032020-01-01157e023662110.1371/journal.pone.0236621Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs.Jocelyn ZhuBeiyi ShenAlmas AbbasiMahsa Hoshmand-KochiHaifang LiTim Q DuongThis study employed deep-learning convolutional neural networks to stage lung disease severity of Coronavirus Disease 2019 (COVID-19) infection on portable chest x-ray (CXR) with radiologist score of disease severity as ground truth. This study consisted of 131 portable CXR from 84 COVID-19 patients (51M 55.1±14.9yo; 29F 60.1±14.3yo; 4 missing information). Three expert chest radiologists scored the left and right lung separately based on the degree of opacity (0-3) and geographic extent (0-4). Deep-learning convolutional neural network (CNN) was used to predict lung disease severity scores. Data were split into 80% training and 20% testing datasets. Correlation analysis between AI-predicted versus radiologist scores were analyzed. Comparison was made with traditional and transfer learning. The average opacity score was 2.52 (range: 0-6) with a standard deviation of 0.25 (9.9%) across three readers. The average geographic extent score was 3.42 (range: 0-8) with a standard deviation of 0.57 (16.7%) across three readers. The inter-rater agreement yielded a Fleiss' Kappa of 0.45 for opacity score and 0.71 for extent score. AI-predicted scores strongly correlated with radiologist scores, with the top model yielding a correlation coefficient (R2) of 0.90 (range: 0.73-0.90 for traditional learning and 0.83-0.90 for transfer learning) and a mean absolute error of 8.5% (ranges: 17.2-21.0% and 8.5%-15.5, respectively). Transfer learning generally performed better. In conclusion, deep-learning CNN accurately stages disease severity on portable chest x-ray of COVID-19 lung infection. This approach may prove useful to stage lung disease severity, prognosticate, and predict treatment response and survival, thereby informing risk management and resource allocation.https://doi.org/10.1371/journal.pone.0236621 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Jocelyn Zhu Beiyi Shen Almas Abbasi Mahsa Hoshmand-Kochi Haifang Li Tim Q Duong |
spellingShingle |
Jocelyn Zhu Beiyi Shen Almas Abbasi Mahsa Hoshmand-Kochi Haifang Li Tim Q Duong Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs. PLoS ONE |
author_facet |
Jocelyn Zhu Beiyi Shen Almas Abbasi Mahsa Hoshmand-Kochi Haifang Li Tim Q Duong |
author_sort |
Jocelyn Zhu |
title |
Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs. |
title_short |
Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs. |
title_full |
Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs. |
title_fullStr |
Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs. |
title_full_unstemmed |
Deep transfer learning artificial intelligence accurately stages COVID-19 lung disease severity on portable chest radiographs. |
title_sort |
deep transfer learning artificial intelligence accurately stages covid-19 lung disease severity on portable chest radiographs. |
publisher |
Public Library of Science (PLoS) |
series |
PLoS ONE |
issn |
1932-6203 |
publishDate |
2020-01-01 |
description |
This study employed deep-learning convolutional neural networks to stage lung disease severity of Coronavirus Disease 2019 (COVID-19) infection on portable chest x-ray (CXR) with radiologist score of disease severity as ground truth. This study consisted of 131 portable CXR from 84 COVID-19 patients (51M 55.1±14.9yo; 29F 60.1±14.3yo; 4 missing information). Three expert chest radiologists scored the left and right lung separately based on the degree of opacity (0-3) and geographic extent (0-4). Deep-learning convolutional neural network (CNN) was used to predict lung disease severity scores. Data were split into 80% training and 20% testing datasets. Correlation analysis between AI-predicted versus radiologist scores were analyzed. Comparison was made with traditional and transfer learning. The average opacity score was 2.52 (range: 0-6) with a standard deviation of 0.25 (9.9%) across three readers. The average geographic extent score was 3.42 (range: 0-8) with a standard deviation of 0.57 (16.7%) across three readers. The inter-rater agreement yielded a Fleiss' Kappa of 0.45 for opacity score and 0.71 for extent score. AI-predicted scores strongly correlated with radiologist scores, with the top model yielding a correlation coefficient (R2) of 0.90 (range: 0.73-0.90 for traditional learning and 0.83-0.90 for transfer learning) and a mean absolute error of 8.5% (ranges: 17.2-21.0% and 8.5%-15.5, respectively). Transfer learning generally performed better. In conclusion, deep-learning CNN accurately stages disease severity on portable chest x-ray of COVID-19 lung infection. This approach may prove useful to stage lung disease severity, prognosticate, and predict treatment response and survival, thereby informing risk management and resource allocation. |
url |
https://doi.org/10.1371/journal.pone.0236621 |
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