Linkage mapping and QTL analysis of flowering time in faba bean

Abstract Flowering time marks the transition from vegetative to reproductive growth and is key for optimal yield in any crop. The molecular mechanisms controlling this trait have been extensively studied in model plants such as Arabidopsis thaliana and rice. While knowledge on the molecular regulati...

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Main Authors: David Aguilar-Benitez, Inés Casimiro-Soriguer, Fouad Maalouf, Ana M. Torres
Format: Article
Language:English
Published: Nature Publishing Group 2021-07-01
Series:Scientific Reports
Online Access:https://doi.org/10.1038/s41598-021-92680-4
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spelling doaj-13078279713d419897e15cb9eb02b1ad2021-07-04T11:29:58ZengNature Publishing GroupScientific Reports2045-23222021-07-0111111110.1038/s41598-021-92680-4Linkage mapping and QTL analysis of flowering time in faba beanDavid Aguilar-Benitez0Inés Casimiro-Soriguer1Fouad Maalouf2Ana M. Torres3Área de Genómica y Biotecnología, IFAPA Centro “Alameda del Obispo”Área de Genómica y Biotecnología, IFAPA Centro “Alameda del Obispo”International Center for Agricultural Research in the Dry Areas (ICARDA)Área de Genómica y Biotecnología, IFAPA Centro “Alameda del Obispo”Abstract Flowering time marks the transition from vegetative to reproductive growth and is key for optimal yield in any crop. The molecular mechanisms controlling this trait have been extensively studied in model plants such as Arabidopsis thaliana and rice. While knowledge on the molecular regulation of this trait is rapidly increasing in sequenced galegoid legume crops, understanding in faba bean remains limited. Here we exploited translational genomics from model legume crops to identify and fine map QTLs linked to flowering time in faba bean. Among the 31 candidate genes relevant for flowering control in A. thaliana and Cicer arietinum assayed, 25 could be mapped in a segregating faba bean RIL population. While most of the genes showed conserved synteny among related legume species, none of them co-localized with the 9 significant QTL regions identified. The FT gene, previously implicated in the control of flowering time in numerous members of the temperate legume clade, mapped close to the most relevant stable and conserved QTL in chromosome V. Interestingly, QTL analysis suggests an important role of epigenetic modifications in faba bean flowering control. The new QTLs and candidate genes assayed here provide a robust framework for further genetic studies and will contribute to the elucidation of the molecular mechanisms controlling this trait.https://doi.org/10.1038/s41598-021-92680-4
collection DOAJ
language English
format Article
sources DOAJ
author David Aguilar-Benitez
Inés Casimiro-Soriguer
Fouad Maalouf
Ana M. Torres
spellingShingle David Aguilar-Benitez
Inés Casimiro-Soriguer
Fouad Maalouf
Ana M. Torres
Linkage mapping and QTL analysis of flowering time in faba bean
Scientific Reports
author_facet David Aguilar-Benitez
Inés Casimiro-Soriguer
Fouad Maalouf
Ana M. Torres
author_sort David Aguilar-Benitez
title Linkage mapping and QTL analysis of flowering time in faba bean
title_short Linkage mapping and QTL analysis of flowering time in faba bean
title_full Linkage mapping and QTL analysis of flowering time in faba bean
title_fullStr Linkage mapping and QTL analysis of flowering time in faba bean
title_full_unstemmed Linkage mapping and QTL analysis of flowering time in faba bean
title_sort linkage mapping and qtl analysis of flowering time in faba bean
publisher Nature Publishing Group
series Scientific Reports
issn 2045-2322
publishDate 2021-07-01
description Abstract Flowering time marks the transition from vegetative to reproductive growth and is key for optimal yield in any crop. The molecular mechanisms controlling this trait have been extensively studied in model plants such as Arabidopsis thaliana and rice. While knowledge on the molecular regulation of this trait is rapidly increasing in sequenced galegoid legume crops, understanding in faba bean remains limited. Here we exploited translational genomics from model legume crops to identify and fine map QTLs linked to flowering time in faba bean. Among the 31 candidate genes relevant for flowering control in A. thaliana and Cicer arietinum assayed, 25 could be mapped in a segregating faba bean RIL population. While most of the genes showed conserved synteny among related legume species, none of them co-localized with the 9 significant QTL regions identified. The FT gene, previously implicated in the control of flowering time in numerous members of the temperate legume clade, mapped close to the most relevant stable and conserved QTL in chromosome V. Interestingly, QTL analysis suggests an important role of epigenetic modifications in faba bean flowering control. The new QTLs and candidate genes assayed here provide a robust framework for further genetic studies and will contribute to the elucidation of the molecular mechanisms controlling this trait.
url https://doi.org/10.1038/s41598-021-92680-4
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