A Disease Index for Efficiently Detecting Wheat Fusarium Head Blight Using Sentinel-2 Multispectral Imagery

Rapid, non-destructive detection of wheat Fusarium head blight (FHB) is an important tool for disease control. Red-edge (RE) is a prominent spectral feature for determining crop conditions with the potential to enhance the accuracy of monitoring FHB regionally. This study explored the potential of R...

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Main Authors: Linyi Liu, Yingying Dong, Wenjiang Huang, Xiaoping Du, Binyuan Ren, Linsheng Huang, Qiong Zheng, Huiqin Ma
Format: Article
Language:English
Published: IEEE 2020-01-01
Series:IEEE Access
Subjects:
Online Access:https://ieeexplore.ieee.org/document/9034180/
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spelling doaj-1416290e46ac425f8fd8fb0a7408d0ec2021-03-30T02:11:03ZengIEEEIEEE Access2169-35362020-01-018521815219110.1109/ACCESS.2020.29803109034180A Disease Index for Efficiently Detecting Wheat Fusarium Head Blight Using Sentinel-2 Multispectral ImageryLinyi Liu0https://orcid.org/0000-0003-4587-2489Yingying Dong1https://orcid.org/0000-0002-2865-5020Wenjiang Huang2Xiaoping Du3Binyuan Ren4Linsheng Huang5Qiong Zheng6Huiqin Ma7Key Laboratory of Digital Earth Science, Aerospace Information Research Institute, Chinese Academy of Sciences, Beijing, ChinaKey Laboratory of Digital Earth Science, Aerospace Information Research Institute, Chinese Academy of Sciences, Beijing, ChinaKey Laboratory of Digital Earth Science, Aerospace Information Research Institute, Chinese Academy of Sciences, Beijing, ChinaKey Laboratory of Digital Earth Science, Aerospace Information Research Institute, Chinese Academy of Sciences, Beijing, ChinaNational Agricultural Technology Extension and Service Center, Beijing, ChinaAnhui Engineering Laboratory of Agro-Ecological Big Data, Anhui University, Hefei, ChinaKey Laboratory of Guangdong for Utilization of Remote Sensing and Geographical Information System, Guangdong Open Laboratory of Geospatial Information Technology and Application, Guangzhou Institute of Geography, Guangzhou, ChinaKey Laboratory of Digital Earth Science, Aerospace Information Research Institute, Chinese Academy of Sciences, Beijing, ChinaRapid, non-destructive detection of wheat Fusarium head blight (FHB) is an important tool for disease control. Red-edge (RE) is a prominent spectral feature for determining crop conditions with the potential to enhance the accuracy of monitoring FHB regionally. This study explored the potential of RE for FHB monitoring based on Sentinel-2 Multispectral Instrument (MSI) data. The novel red-edge head blight index (REHBI) was developed to detect FHB at a regional scale. Hyperspectral data at the canopy scale was integrated to simulate Sentinel-2 multispectral reflectance using the relative spectral response (RSR) function of the sensor. Then, many differential and ratio combinations of Sentinel-2 bands that were sensitive to FHB severity were selected. REHBI was established based on these basic vegetation indexes (VIs), and the model developed from REHBI performed best in monitoring FHB severity (R<sup>2</sup> = 0.82, RMSE = 10.1). Additionally, the infected canopies with disease index (DI) values between 10 and 50 were classified as slightly diseased canopies. Ordinary least square (OLS) was used to test the performance of REHBI and two conventional VIs, i.e., OSAVI and RDVI, in monitoring slightly diseased canopies; REHBI outperformed these alternatives (R<sup>2</sup> = 0.69, RMSE = 3.6). To approximate real agricultural conditions, Poisson noise was added to the simulated Sentinel-2 multispectral data and generalized performance of VIs was evaluated again; REHBI still had the highest R<sup>2</sup> and lowest RMSE values (0.74 and 12.6, respectively). Finally, to validate REHBI's ability to detect FHB infection in agricultural production, it was applied to monitoring FHB in the wheat planting areas of Changfeng and Dingyuan counties from Sentinel-2 imagery. Generally, REHBI performed better in disease monitoring than OSAVI and RDVI. The overall accuracy was up to 78.6%, and the kappa coefficient was 0.51. Experimental results demonstrate that REHBI can be used to monitor FHB.https://ieeexplore.ieee.org/document/9034180/Red-edgewheat fusarium head blightSentinel-2spectral analysisdisease index
collection DOAJ
language English
format Article
sources DOAJ
author Linyi Liu
Yingying Dong
Wenjiang Huang
Xiaoping Du
Binyuan Ren
Linsheng Huang
Qiong Zheng
Huiqin Ma
spellingShingle Linyi Liu
Yingying Dong
Wenjiang Huang
Xiaoping Du
Binyuan Ren
Linsheng Huang
Qiong Zheng
Huiqin Ma
A Disease Index for Efficiently Detecting Wheat Fusarium Head Blight Using Sentinel-2 Multispectral Imagery
IEEE Access
Red-edge
wheat fusarium head blight
Sentinel-2
spectral analysis
disease index
author_facet Linyi Liu
Yingying Dong
Wenjiang Huang
Xiaoping Du
Binyuan Ren
Linsheng Huang
Qiong Zheng
Huiqin Ma
author_sort Linyi Liu
title A Disease Index for Efficiently Detecting Wheat Fusarium Head Blight Using Sentinel-2 Multispectral Imagery
title_short A Disease Index for Efficiently Detecting Wheat Fusarium Head Blight Using Sentinel-2 Multispectral Imagery
title_full A Disease Index for Efficiently Detecting Wheat Fusarium Head Blight Using Sentinel-2 Multispectral Imagery
title_fullStr A Disease Index for Efficiently Detecting Wheat Fusarium Head Blight Using Sentinel-2 Multispectral Imagery
title_full_unstemmed A Disease Index for Efficiently Detecting Wheat Fusarium Head Blight Using Sentinel-2 Multispectral Imagery
title_sort disease index for efficiently detecting wheat fusarium head blight using sentinel-2 multispectral imagery
publisher IEEE
series IEEE Access
issn 2169-3536
publishDate 2020-01-01
description Rapid, non-destructive detection of wheat Fusarium head blight (FHB) is an important tool for disease control. Red-edge (RE) is a prominent spectral feature for determining crop conditions with the potential to enhance the accuracy of monitoring FHB regionally. This study explored the potential of RE for FHB monitoring based on Sentinel-2 Multispectral Instrument (MSI) data. The novel red-edge head blight index (REHBI) was developed to detect FHB at a regional scale. Hyperspectral data at the canopy scale was integrated to simulate Sentinel-2 multispectral reflectance using the relative spectral response (RSR) function of the sensor. Then, many differential and ratio combinations of Sentinel-2 bands that were sensitive to FHB severity were selected. REHBI was established based on these basic vegetation indexes (VIs), and the model developed from REHBI performed best in monitoring FHB severity (R<sup>2</sup> = 0.82, RMSE = 10.1). Additionally, the infected canopies with disease index (DI) values between 10 and 50 were classified as slightly diseased canopies. Ordinary least square (OLS) was used to test the performance of REHBI and two conventional VIs, i.e., OSAVI and RDVI, in monitoring slightly diseased canopies; REHBI outperformed these alternatives (R<sup>2</sup> = 0.69, RMSE = 3.6). To approximate real agricultural conditions, Poisson noise was added to the simulated Sentinel-2 multispectral data and generalized performance of VIs was evaluated again; REHBI still had the highest R<sup>2</sup> and lowest RMSE values (0.74 and 12.6, respectively). Finally, to validate REHBI's ability to detect FHB infection in agricultural production, it was applied to monitoring FHB in the wheat planting areas of Changfeng and Dingyuan counties from Sentinel-2 imagery. Generally, REHBI performed better in disease monitoring than OSAVI and RDVI. The overall accuracy was up to 78.6%, and the kappa coefficient was 0.51. Experimental results demonstrate that REHBI can be used to monitor FHB.
topic Red-edge
wheat fusarium head blight
Sentinel-2
spectral analysis
disease index
url https://ieeexplore.ieee.org/document/9034180/
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