Beta-lactamase database (BLDB) – structure and function

Beta-Lactamase Database (BLDB) is a comprehensive, manually curated public resource providing up-to-date structural and functional information focused on this superfamily of enzymes with a great impact on antibiotic resistance. All the enzymes reported and characterised in the literature are present...

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Main Authors: Thierry Naas, Saoussen Oueslati, Rémy A. Bonnin, Maria Laura Dabos, Agustin Zavala, Laurent Dortet, Pascal Retailleau, Bogdan I. Iorga
Format: Article
Language:English
Published: Taylor & Francis Group 2017-01-01
Series:Journal of Enzyme Inhibition and Medicinal Chemistry
Subjects:
Online Access:http://dx.doi.org/10.1080/14756366.2017.1344235
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spelling doaj-154e783ec8da460caaab16190765098d2020-11-25T02:01:55ZengTaylor & Francis GroupJournal of Enzyme Inhibition and Medicinal Chemistry1475-63661475-63742017-01-0132191791910.1080/14756366.2017.13442351344235Beta-lactamase database (BLDB) – structure and functionThierry Naas0Saoussen Oueslati1Rémy A. Bonnin2Maria Laura Dabos3Agustin Zavala4Laurent Dortet5Pascal Retailleau6Bogdan I. Iorga7Université et Faculté de Médecine Paris-Sud, LabEx LERMITUniversité et Faculté de Médecine Paris-Sud, LabEx LERMITUniversité et Faculté de Médecine Paris-Sud, LabEx LERMITUniversité et Faculté de Médecine Paris-Sud, LabEx LERMITUniversité et Faculté de Médecine Paris-Sud, LabEx LERMITUniversité et Faculté de Médecine Paris-Sud, LabEx LERMITUniversité Paris-Saclay, LabEx LERMITUniversité Paris-Saclay, LabEx LERMITBeta-Lactamase Database (BLDB) is a comprehensive, manually curated public resource providing up-to-date structural and functional information focused on this superfamily of enzymes with a great impact on antibiotic resistance. All the enzymes reported and characterised in the literature are presented according to the class (A, B, C and D), family and subfamily to which they belong. All three-dimensional structures of β-lactamases present in the Protein Data Bank are also shown. The characterisation of representative mutants and hydrolytic profiles (kinetics) completes the picture and altogether these four elements constitute the essential foundation for a better understanding of the structure-function relationship within this enzymes family. BLDB can be queried using different protein- and nucleotide-based BLAST searches, which represents a key feature of particular importance in the context of the surveillance of the evolution of the antibiotic resistance. BLDB is available online at http://bldb.eu without any registration and supports all modern browsers.http://dx.doi.org/10.1080/14756366.2017.1344235Databasebeta-lactamaseantibiotic resistancehydrolytic profilemutant
collection DOAJ
language English
format Article
sources DOAJ
author Thierry Naas
Saoussen Oueslati
Rémy A. Bonnin
Maria Laura Dabos
Agustin Zavala
Laurent Dortet
Pascal Retailleau
Bogdan I. Iorga
spellingShingle Thierry Naas
Saoussen Oueslati
Rémy A. Bonnin
Maria Laura Dabos
Agustin Zavala
Laurent Dortet
Pascal Retailleau
Bogdan I. Iorga
Beta-lactamase database (BLDB) – structure and function
Journal of Enzyme Inhibition and Medicinal Chemistry
Database
beta-lactamase
antibiotic resistance
hydrolytic profile
mutant
author_facet Thierry Naas
Saoussen Oueslati
Rémy A. Bonnin
Maria Laura Dabos
Agustin Zavala
Laurent Dortet
Pascal Retailleau
Bogdan I. Iorga
author_sort Thierry Naas
title Beta-lactamase database (BLDB) – structure and function
title_short Beta-lactamase database (BLDB) – structure and function
title_full Beta-lactamase database (BLDB) – structure and function
title_fullStr Beta-lactamase database (BLDB) – structure and function
title_full_unstemmed Beta-lactamase database (BLDB) – structure and function
title_sort beta-lactamase database (bldb) – structure and function
publisher Taylor & Francis Group
series Journal of Enzyme Inhibition and Medicinal Chemistry
issn 1475-6366
1475-6374
publishDate 2017-01-01
description Beta-Lactamase Database (BLDB) is a comprehensive, manually curated public resource providing up-to-date structural and functional information focused on this superfamily of enzymes with a great impact on antibiotic resistance. All the enzymes reported and characterised in the literature are presented according to the class (A, B, C and D), family and subfamily to which they belong. All three-dimensional structures of β-lactamases present in the Protein Data Bank are also shown. The characterisation of representative mutants and hydrolytic profiles (kinetics) completes the picture and altogether these four elements constitute the essential foundation for a better understanding of the structure-function relationship within this enzymes family. BLDB can be queried using different protein- and nucleotide-based BLAST searches, which represents a key feature of particular importance in the context of the surveillance of the evolution of the antibiotic resistance. BLDB is available online at http://bldb.eu without any registration and supports all modern browsers.
topic Database
beta-lactamase
antibiotic resistance
hydrolytic profile
mutant
url http://dx.doi.org/10.1080/14756366.2017.1344235
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