Comparative analyses of the complete mitochondrial genomes of Dosinia clams and their phylogenetic position within Veneridae.

Mitochondrial genomes have proved to be a powerful tool in resolving phylogenetic relationship. In order to understand the mitogenome characteristics and phylogenetic position of the genus Dosinia, we sequenced the complete mitochondrial genomes of Dosinia altior and Dosinia troscheli (Bivalvia: Ven...

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Main Authors: Changda Lv, Qi Li, Lingfeng Kong
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2018-01-01
Series:PLoS ONE
Online Access:http://europepmc.org/articles/PMC5931646?pdf=render
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spelling doaj-18d83b5b15bd437eb1aadfdbdddbc75a2020-11-24T20:47:58ZengPublic Library of Science (PLoS)PLoS ONE1932-62032018-01-01135e019646610.1371/journal.pone.0196466Comparative analyses of the complete mitochondrial genomes of Dosinia clams and their phylogenetic position within Veneridae.Changda LvQi LiLingfeng KongMitochondrial genomes have proved to be a powerful tool in resolving phylogenetic relationship. In order to understand the mitogenome characteristics and phylogenetic position of the genus Dosinia, we sequenced the complete mitochondrial genomes of Dosinia altior and Dosinia troscheli (Bivalvia: Veneridae), compared them with that of Dosinia japonica and established a phylogenetic tree for Veneridae. The mitogenomes of D. altior (17,536 bp) and D. troscheli (17,229 bp) are the two smallest in Veneridae, which include 13 protein-coding genes, 2 ribosomal RNA genes, 22 tRNA genes, and non-coding regions. The mitogenomes of the Dosinia species are similar in size, gene content, AT content, AT- and GC- skews, and gene arrangement. The phylogenetic relationships of family Veneridae were established based on 12 concatenated protein-coding genes using maximum likelihood and Bayesian analyses, which supported that Dosininae and Meretricinae have a closer relationship, with Tapetinae being the sister taxon. The information obtained in this study will contribute to further understanding of the molecular features of bivalve mitogenomes and the evolutionary history of the genus Dosinia.http://europepmc.org/articles/PMC5931646?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Changda Lv
Qi Li
Lingfeng Kong
spellingShingle Changda Lv
Qi Li
Lingfeng Kong
Comparative analyses of the complete mitochondrial genomes of Dosinia clams and their phylogenetic position within Veneridae.
PLoS ONE
author_facet Changda Lv
Qi Li
Lingfeng Kong
author_sort Changda Lv
title Comparative analyses of the complete mitochondrial genomes of Dosinia clams and their phylogenetic position within Veneridae.
title_short Comparative analyses of the complete mitochondrial genomes of Dosinia clams and their phylogenetic position within Veneridae.
title_full Comparative analyses of the complete mitochondrial genomes of Dosinia clams and their phylogenetic position within Veneridae.
title_fullStr Comparative analyses of the complete mitochondrial genomes of Dosinia clams and their phylogenetic position within Veneridae.
title_full_unstemmed Comparative analyses of the complete mitochondrial genomes of Dosinia clams and their phylogenetic position within Veneridae.
title_sort comparative analyses of the complete mitochondrial genomes of dosinia clams and their phylogenetic position within veneridae.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2018-01-01
description Mitochondrial genomes have proved to be a powerful tool in resolving phylogenetic relationship. In order to understand the mitogenome characteristics and phylogenetic position of the genus Dosinia, we sequenced the complete mitochondrial genomes of Dosinia altior and Dosinia troscheli (Bivalvia: Veneridae), compared them with that of Dosinia japonica and established a phylogenetic tree for Veneridae. The mitogenomes of D. altior (17,536 bp) and D. troscheli (17,229 bp) are the two smallest in Veneridae, which include 13 protein-coding genes, 2 ribosomal RNA genes, 22 tRNA genes, and non-coding regions. The mitogenomes of the Dosinia species are similar in size, gene content, AT content, AT- and GC- skews, and gene arrangement. The phylogenetic relationships of family Veneridae were established based on 12 concatenated protein-coding genes using maximum likelihood and Bayesian analyses, which supported that Dosininae and Meretricinae have a closer relationship, with Tapetinae being the sister taxon. The information obtained in this study will contribute to further understanding of the molecular features of bivalve mitogenomes and the evolutionary history of the genus Dosinia.
url http://europepmc.org/articles/PMC5931646?pdf=render
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AT qili comparativeanalysesofthecompletemitochondrialgenomesofdosiniaclamsandtheirphylogeneticpositionwithinveneridae
AT lingfengkong comparativeanalysesofthecompletemitochondrialgenomesofdosiniaclamsandtheirphylogeneticpositionwithinveneridae
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