Closed-loop, multichannel experimentation using the open-source NeuroRighter electrophysiology platform

Single neuron feedback control techniques, such as voltage clamp and dynamic clamp, have enabled numerous advances in our understanding of ion channels, electrochemical signaling, and neural dynamics. Although commercially available multichannel recording and stimulation systems are commonly used fo...

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Main Authors: Jonathan Paul Newman, Riley eZeller-Townson, Ming-fai eFong, Sharanya eArcot Desai, Robert E Gross, Steve M Potter
Format: Article
Language:English
Published: Frontiers Media S.A. 2013-01-01
Series:Frontiers in Neural Circuits
Subjects:
Online Access:http://journal.frontiersin.org/Journal/10.3389/fncir.2012.00098/full
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spelling doaj-1c1c4f1bcba9410cbe615da63891078d2020-11-24T22:05:54ZengFrontiers Media S.A.Frontiers in Neural Circuits1662-51102013-01-01610.3389/fncir.2012.0009832539Closed-loop, multichannel experimentation using the open-source NeuroRighter electrophysiology platformJonathan Paul Newman0Riley eZeller-Townson1Ming-fai eFong2Ming-fai eFong3Sharanya eArcot Desai4Sharanya eArcot Desai5Robert E Gross6Robert E Gross7Steve M Potter8Georgia Institute of Technology and Emory University School of MedicineGeorgia Institute of Technology and Emory University School of MedicineGeorgia Institute of Technology and Emory University School of MedicineEmory University School of MedicineGeorgia Institute of Technology and Emory University School of MedicineEmory University School of MedicineGeorgia Institute of Technology and Emory University School of MedicineEmory University School of MedicineGeorgia Institute of Technology and Emory University School of MedicineSingle neuron feedback control techniques, such as voltage clamp and dynamic clamp, have enabled numerous advances in our understanding of ion channels, electrochemical signaling, and neural dynamics. Although commercially available multichannel recording and stimulation systems are commonly used for studying neural processing at the network level, they provide little native support for real-time feedback. We developed the open-source NeuroRighter multichannel electrophysiology hardware and software platform for closed-loop multichannel control with a focus on accessibility and low cost. NeuroRighter allows 64 channels of stimulation and recording for around US $10,000, along with the ability to integrate with other software and hardware. Here, we present substantial enhancements to the NeuroRighter platform, including a redesigned desktop application, a new stimulation subsystem allowing arbitrary stimulation patterns, low-latency data servers for accessing data streams, and a new application programming interface (API) for creating closed-loop protocols that can be inserted into NeuroRighter as plugin programs. This greatly simplifies the design of sophisticated real-time experiments without sacrificing the power and speed of a compiled programming language. Here we present a detailed description of NeuroRighter as a stand alone application, its plugin API, and an extensive set of case studies that highlight the system's abilities for conducting closed-loop, multichannel interfacing experiments.http://journal.frontiersin.org/Journal/10.3389/fncir.2012.00098/fullElectrophysiologyReal-timemicroelectrode arrayclosed-loopopen-sourcemultichannel
collection DOAJ
language English
format Article
sources DOAJ
author Jonathan Paul Newman
Riley eZeller-Townson
Ming-fai eFong
Ming-fai eFong
Sharanya eArcot Desai
Sharanya eArcot Desai
Robert E Gross
Robert E Gross
Steve M Potter
spellingShingle Jonathan Paul Newman
Riley eZeller-Townson
Ming-fai eFong
Ming-fai eFong
Sharanya eArcot Desai
Sharanya eArcot Desai
Robert E Gross
Robert E Gross
Steve M Potter
Closed-loop, multichannel experimentation using the open-source NeuroRighter electrophysiology platform
Frontiers in Neural Circuits
Electrophysiology
Real-time
microelectrode array
closed-loop
open-source
multichannel
author_facet Jonathan Paul Newman
Riley eZeller-Townson
Ming-fai eFong
Ming-fai eFong
Sharanya eArcot Desai
Sharanya eArcot Desai
Robert E Gross
Robert E Gross
Steve M Potter
author_sort Jonathan Paul Newman
title Closed-loop, multichannel experimentation using the open-source NeuroRighter electrophysiology platform
title_short Closed-loop, multichannel experimentation using the open-source NeuroRighter electrophysiology platform
title_full Closed-loop, multichannel experimentation using the open-source NeuroRighter electrophysiology platform
title_fullStr Closed-loop, multichannel experimentation using the open-source NeuroRighter electrophysiology platform
title_full_unstemmed Closed-loop, multichannel experimentation using the open-source NeuroRighter electrophysiology platform
title_sort closed-loop, multichannel experimentation using the open-source neurorighter electrophysiology platform
publisher Frontiers Media S.A.
series Frontiers in Neural Circuits
issn 1662-5110
publishDate 2013-01-01
description Single neuron feedback control techniques, such as voltage clamp and dynamic clamp, have enabled numerous advances in our understanding of ion channels, electrochemical signaling, and neural dynamics. Although commercially available multichannel recording and stimulation systems are commonly used for studying neural processing at the network level, they provide little native support for real-time feedback. We developed the open-source NeuroRighter multichannel electrophysiology hardware and software platform for closed-loop multichannel control with a focus on accessibility and low cost. NeuroRighter allows 64 channels of stimulation and recording for around US $10,000, along with the ability to integrate with other software and hardware. Here, we present substantial enhancements to the NeuroRighter platform, including a redesigned desktop application, a new stimulation subsystem allowing arbitrary stimulation patterns, low-latency data servers for accessing data streams, and a new application programming interface (API) for creating closed-loop protocols that can be inserted into NeuroRighter as plugin programs. This greatly simplifies the design of sophisticated real-time experiments without sacrificing the power and speed of a compiled programming language. Here we present a detailed description of NeuroRighter as a stand alone application, its plugin API, and an extensive set of case studies that highlight the system's abilities for conducting closed-loop, multichannel interfacing experiments.
topic Electrophysiology
Real-time
microelectrode array
closed-loop
open-source
multichannel
url http://journal.frontiersin.org/Journal/10.3389/fncir.2012.00098/full
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