Precision Medicine in Relapsed and Refractory Childhood Cancers: Single-center Experience, Literature Review, and Meta-analysis

Objective: To date, the understanding of pediatric tumor genomics and how these genetic aberrations correlate with clinical outcome is lacking. Here, we report our experience with the next-generation sequencing (NGS) test program and discuss implications for the inclusion of molecular profiling into...

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Main Authors: Oz Mordechai, Myriam Weyl Ben-Arush
Format: Article
Language:English
Published: Rambam Health Care Campus 2018-07-01
Series:Rambam Maimonides Medical Journal
Subjects:
NGS
Online Access:https://www.rmmj.org.il/issues/38/863/manuscript
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spelling doaj-1d3a77f66668438cb1a381d91f4029b92020-11-25T00:37:29ZengRambam Health Care CampusRambam Maimonides Medical Journal2076-91722018-07-0193e001910.5041/RMMJ.10342Precision Medicine in Relapsed and Refractory Childhood Cancers: Single-center Experience, Literature Review, and Meta-analysisOz Mordechai0Myriam Weyl Ben-Arush1Department of Pediatric Hematology Oncology, Ruth Rappaport Children’s Hospital, Rambam Health Care Campus, HaifaDepartment of Pediatric Hematology Oncology, Ruth Rappaport Children’s Hospital, Rambam Health Care Campus, Haifa and Rappaport Faculty of Medicine, Technion–Israel Institute of Technology, Haifa, IsraelObjective: To date, the understanding of pediatric tumor genomics and how these genetic aberrations correlate with clinical outcome is lacking. Here, we report our experience with the next-generation sequencing (NGS) test program and discuss implications for the inclusion of molecular profiling into clinical pediatric oncology trials. We also aimed to explore studies on NGS in pediatric cancers and to quantify the variability of finding actionable mutations and the clinical implications. Methods: We present a retrospective case series of all patients whose tumor tissue underwent NGS tests during treatment in our department. We also reviewed the literature and carried out a meta-analysis to explore studies on NGS in pediatric cancers. Results: In 35/37 (94%) patients, we found at least one genomic alteration (GA); mean number of GAs per patient was 2 (range, 0–67), while 164 GAs were detected. Only 3 (8%) patients received precision medicine due to their GAs for a mean of 9 months (range, 5–14 months). Four studies were included in the meta-analysis. The pooled positive actionable mutation rate was 52% (95% CI 39%–66%), and the pooled rate of children who received precision medicine was 10% (95% CI 3%–20%). Conclusions: In children and young adults with high-risk, recurrent, or refractory malignancies, tumor profiling results have clinical implications, despite barriers to the use of matched precision therapy.https://www.rmmj.org.il/issues/38/863/manuscriptMeta-analysisNGSpediatric oncologyprecisionsolid tumors
collection DOAJ
language English
format Article
sources DOAJ
author Oz Mordechai
Myriam Weyl Ben-Arush
spellingShingle Oz Mordechai
Myriam Weyl Ben-Arush
Precision Medicine in Relapsed and Refractory Childhood Cancers: Single-center Experience, Literature Review, and Meta-analysis
Rambam Maimonides Medical Journal
Meta-analysis
NGS
pediatric oncology
precision
solid tumors
author_facet Oz Mordechai
Myriam Weyl Ben-Arush
author_sort Oz Mordechai
title Precision Medicine in Relapsed and Refractory Childhood Cancers: Single-center Experience, Literature Review, and Meta-analysis
title_short Precision Medicine in Relapsed and Refractory Childhood Cancers: Single-center Experience, Literature Review, and Meta-analysis
title_full Precision Medicine in Relapsed and Refractory Childhood Cancers: Single-center Experience, Literature Review, and Meta-analysis
title_fullStr Precision Medicine in Relapsed and Refractory Childhood Cancers: Single-center Experience, Literature Review, and Meta-analysis
title_full_unstemmed Precision Medicine in Relapsed and Refractory Childhood Cancers: Single-center Experience, Literature Review, and Meta-analysis
title_sort precision medicine in relapsed and refractory childhood cancers: single-center experience, literature review, and meta-analysis
publisher Rambam Health Care Campus
series Rambam Maimonides Medical Journal
issn 2076-9172
publishDate 2018-07-01
description Objective: To date, the understanding of pediatric tumor genomics and how these genetic aberrations correlate with clinical outcome is lacking. Here, we report our experience with the next-generation sequencing (NGS) test program and discuss implications for the inclusion of molecular profiling into clinical pediatric oncology trials. We also aimed to explore studies on NGS in pediatric cancers and to quantify the variability of finding actionable mutations and the clinical implications. Methods: We present a retrospective case series of all patients whose tumor tissue underwent NGS tests during treatment in our department. We also reviewed the literature and carried out a meta-analysis to explore studies on NGS in pediatric cancers. Results: In 35/37 (94%) patients, we found at least one genomic alteration (GA); mean number of GAs per patient was 2 (range, 0–67), while 164 GAs were detected. Only 3 (8%) patients received precision medicine due to their GAs for a mean of 9 months (range, 5–14 months). Four studies were included in the meta-analysis. The pooled positive actionable mutation rate was 52% (95% CI 39%–66%), and the pooled rate of children who received precision medicine was 10% (95% CI 3%–20%). Conclusions: In children and young adults with high-risk, recurrent, or refractory malignancies, tumor profiling results have clinical implications, despite barriers to the use of matched precision therapy.
topic Meta-analysis
NGS
pediatric oncology
precision
solid tumors
url https://www.rmmj.org.il/issues/38/863/manuscript
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