Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov.

Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov.

Strain FF2T was isolated from the blood sample of a 35 year-old febrile Senegalese male, in Dielmo, Senegal. This strain exhibited a 97.47% 16S rRNA sequence identity with Diaminobutyricimonas aerilata. The score from MALDI-TOF-MS does not allow any identification. Using a polyphasic study made of p...

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Main Authors: C.I. Lo, R. Padhmanabhan, O. Mediannikov, A.K. Keita, C. Michelle, J. Terras, N. Faye, D. Raoult, P.-E. Fournier, F. Fenollar
Format: Article
Language:English
Published: Elsevier 2015-11-01
Series:New Microbes and New Infections
Subjects:
Culturomics
Diaminobutyricimonas massiliensis
genome
taxono-genomics
Online Access:http://www.sciencedirect.com/science/article/pii/S2052297515000748
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spelling doaj-1d74046c874642f4998b2da3727dd38d2020-11-24T21:53:22ZengElsevierNew Microbes and New Infections2052-29752015-11-018C314010.1016/j.nmni.2015.09.009Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov.C.I. Lo0R. Padhmanabhan1O. Mediannikov2A.K. Keita3C. Michelle4J. Terras5N. Faye6D. Raoult7P.-E. Fournier8F. Fenollar9Institut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceUniversité Cheikh Anta Diop de Dakar, Laboratoire de Parasitologie générale, Dakar, SenegalInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceStrain FF2T was isolated from the blood sample of a 35 year-old febrile Senegalese male, in Dielmo, Senegal. This strain exhibited a 97.47% 16S rRNA sequence identity with Diaminobutyricimonas aerilata. The score from MALDI-TOF-MS does not allow any identification. Using a polyphasic study made of phenotypic and genomic analyses, strain FF2T was Gram-negative, aerobic, motile, rod-shaped, and exhibited a genome of 3,227,513 bp (1 chromosome but no plasmid) with a G+C content of 70.13% that coded 3,091 protein-coding and 56 RNA genes. On the basis of these data, we propose the creation of Diaminobutyricimonas massiliensis sp. nov.http://www.sciencedirect.com/science/article/pii/S2052297515000748CulturomicsDiaminobutyricimonas massiliensisgenometaxono-genomics
collection DOAJ
language English
format Article
sources DOAJ
author C.I. Lo
R. Padhmanabhan
O. Mediannikov
A.K. Keita
C. Michelle
J. Terras
N. Faye
D. Raoult
P.-E. Fournier
F. Fenollar
spellingShingle C.I. Lo
R. Padhmanabhan
O. Mediannikov
A.K. Keita
C. Michelle
J. Terras
N. Faye
D. Raoult
P.-E. Fournier
F. Fenollar
Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov.
New Microbes and New Infections
Culturomics
Diaminobutyricimonas massiliensis
genome
taxono-genomics
author_facet C.I. Lo
R. Padhmanabhan
O. Mediannikov
A.K. Keita
C. Michelle
J. Terras
N. Faye
D. Raoult
P.-E. Fournier
F. Fenollar
author_sort C.I. Lo
title Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov.
title_short Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov.
title_full Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov.
title_fullStr Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov.
title_full_unstemmed Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov.
title_sort noncontiguous finished genome sequence and description of diaminobutyricimonas massiliensis strain ff2t sp. nov.
publisher Elsevier
series New Microbes and New Infections
issn 2052-2975
publishDate 2015-11-01
description Strain FF2T was isolated from the blood sample of a 35 year-old febrile Senegalese male, in Dielmo, Senegal. This strain exhibited a 97.47% 16S rRNA sequence identity with Diaminobutyricimonas aerilata. The score from MALDI-TOF-MS does not allow any identification. Using a polyphasic study made of phenotypic and genomic analyses, strain FF2T was Gram-negative, aerobic, motile, rod-shaped, and exhibited a genome of 3,227,513 bp (1 chromosome but no plasmid) with a G+C content of 70.13% that coded 3,091 protein-coding and 56 RNA genes. On the basis of these data, we propose the creation of Diaminobutyricimonas massiliensis sp. nov.
topic Culturomics
Diaminobutyricimonas massiliensis
genome
taxono-genomics
url http://www.sciencedirect.com/science/article/pii/S2052297515000748
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