Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov.
Strain FF2T was isolated from the blood sample of a 35 year-old febrile Senegalese male, in Dielmo, Senegal. This strain exhibited a 97.47% 16S rRNA sequence identity with Diaminobutyricimonas aerilata. The score from MALDI-TOF-MS does not allow any identification. Using a polyphasic study made of p...
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doaj-1d74046c874642f4998b2da3727dd38d2020-11-24T21:53:22ZengElsevierNew Microbes and New Infections2052-29752015-11-018C314010.1016/j.nmni.2015.09.009Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov.C.I. Lo0R. Padhmanabhan1O. Mediannikov2A.K. Keita3C. Michelle4J. Terras5N. Faye6D. Raoult7P.-E. Fournier8F. Fenollar9Institut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceUniversité Cheikh Anta Diop de Dakar, Laboratoire de Parasitologie générale, Dakar, SenegalInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceInstitut hospitalo-universitaire Méditerranée-infection, URMITE, UM63, CNRS 7278, IRD 198, Inserm U1095, Faculté de médecine, Aix-Marseille Université, Marseille, FranceStrain FF2T was isolated from the blood sample of a 35 year-old febrile Senegalese male, in Dielmo, Senegal. This strain exhibited a 97.47% 16S rRNA sequence identity with Diaminobutyricimonas aerilata. The score from MALDI-TOF-MS does not allow any identification. Using a polyphasic study made of phenotypic and genomic analyses, strain FF2T was Gram-negative, aerobic, motile, rod-shaped, and exhibited a genome of 3,227,513 bp (1 chromosome but no plasmid) with a G+C content of 70.13% that coded 3,091 protein-coding and 56 RNA genes. On the basis of these data, we propose the creation of Diaminobutyricimonas massiliensis sp. nov.http://www.sciencedirect.com/science/article/pii/S2052297515000748CulturomicsDiaminobutyricimonas massiliensisgenometaxono-genomics |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
C.I. Lo R. Padhmanabhan O. Mediannikov A.K. Keita C. Michelle J. Terras N. Faye D. Raoult P.-E. Fournier F. Fenollar |
spellingShingle |
C.I. Lo R. Padhmanabhan O. Mediannikov A.K. Keita C. Michelle J. Terras N. Faye D. Raoult P.-E. Fournier F. Fenollar Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov. New Microbes and New Infections Culturomics Diaminobutyricimonas massiliensis genome taxono-genomics |
author_facet |
C.I. Lo R. Padhmanabhan O. Mediannikov A.K. Keita C. Michelle J. Terras N. Faye D. Raoult P.-E. Fournier F. Fenollar |
author_sort |
C.I. Lo |
title |
Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov. |
title_short |
Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov. |
title_full |
Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov. |
title_fullStr |
Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov. |
title_full_unstemmed |
Noncontiguous finished genome sequence and description of Diaminobutyricimonas massiliensis strain FF2T sp. nov. |
title_sort |
noncontiguous finished genome sequence and description of diaminobutyricimonas massiliensis strain ff2t sp. nov. |
publisher |
Elsevier |
series |
New Microbes and New Infections |
issn |
2052-2975 |
publishDate |
2015-11-01 |
description |
Strain FF2T was isolated from the blood sample of a 35 year-old febrile Senegalese male, in Dielmo, Senegal. This strain exhibited a 97.47% 16S rRNA sequence identity with Diaminobutyricimonas aerilata. The score from MALDI-TOF-MS does not allow any identification. Using a polyphasic study made of phenotypic and genomic analyses, strain FF2T was Gram-negative, aerobic, motile, rod-shaped, and exhibited a genome of 3,227,513 bp (1 chromosome but no plasmid) with a G+C content of 70.13% that coded 3,091 protein-coding and 56 RNA genes. On the basis of these data, we propose the creation of Diaminobutyricimonas massiliensis sp. nov. |
topic |
Culturomics Diaminobutyricimonas massiliensis genome taxono-genomics |
url |
http://www.sciencedirect.com/science/article/pii/S2052297515000748 |
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