First report and molecular characterization of the dagger nematode, Xiphinema oxycaudatum (Nematoda, Dorylaimidae) from South Africa

Plant-parasitic nematodes of the genus Xiphinema Cobb, 1913 comprise a complex group of nematode species, some of which are important vectors of plant viruses. During a field survey to determine the soil health of an abandoned honeybush (Cyclopia genistoides) monoculture, a high de...

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Main Authors: Fisayo Y. Daramola, Rinus Knoetze, Antoinette Swart, Antoinette P. Malan
Format: Article
Language:English
Published: Pensoft Publishers 2019-12-01
Series:ZooKeys
Online Access:https://zookeys.pensoft.net/article/35281/download/pdf/
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spelling doaj-1e98624946db4960b38e558d105ea0c62020-11-25T00:11:43ZengPensoft PublishersZooKeys1313-29891313-29702019-12-0189411710.3897/zookeys.894.3528135281First report and molecular characterization of the dagger nematode, Xiphinema oxycaudatum (Nematoda, Dorylaimidae) from South AfricaFisayo Y. Daramola0Rinus Knoetze1Antoinette Swart2Antoinette P. Malan3Department of Conservation Ecology and EntomologyPlant Protection Division, Agriculture Research CouncilARC-Plant Protection Research InstituteDepartment of Conservation Ecology and Entomology Plant-parasitic nematodes of the genus Xiphinema Cobb, 1913 comprise a complex group of nematode species, some of which are important vectors of plant viruses. During a field survey to determine the soil health of an abandoned honeybush (Cyclopia genistoides) monoculture, a high density of the dagger nematode, Xiphinema oxycaudatum Lamberti & Bleve-Zacheo, 1979 (Nematoda, Dorylaimidae), was observed in soil around the roots of honeybush plants in an abandoned farmland at Bereaville, an old mission station in the Western Cape province of South Africa. Soil samples were taken from the rhizosphere of plants and nematodes were extracted from the soil using a modified extraction tray method. Specimen of the dagger nematodes were processed for scanning electron microscopy, morphological and molecular analysis. Molecular profiling of the nematode species was done in order to give an accurate diagnosis and to effectively discriminate the nematode from other species within the Xiphinema americanum group. Phylogenetic analysis based on the D2D3 expansion segment of the 28S gene supported a close relationship of species within the americanum group, however, the protein-coding cytochrome oxidase (coxI) of the mitochondrial gene provided a useful tool for distinguishing the nematode from other species within the group. This study represents the first report of X. oxycaudatum from South Africa. https://zookeys.pensoft.net/article/35281/download/pdf/
collection DOAJ
language English
format Article
sources DOAJ
author Fisayo Y. Daramola
Rinus Knoetze
Antoinette Swart
Antoinette P. Malan
spellingShingle Fisayo Y. Daramola
Rinus Knoetze
Antoinette Swart
Antoinette P. Malan
First report and molecular characterization of the dagger nematode, Xiphinema oxycaudatum (Nematoda, Dorylaimidae) from South Africa
ZooKeys
author_facet Fisayo Y. Daramola
Rinus Knoetze
Antoinette Swart
Antoinette P. Malan
author_sort Fisayo Y. Daramola
title First report and molecular characterization of the dagger nematode, Xiphinema oxycaudatum (Nematoda, Dorylaimidae) from South Africa
title_short First report and molecular characterization of the dagger nematode, Xiphinema oxycaudatum (Nematoda, Dorylaimidae) from South Africa
title_full First report and molecular characterization of the dagger nematode, Xiphinema oxycaudatum (Nematoda, Dorylaimidae) from South Africa
title_fullStr First report and molecular characterization of the dagger nematode, Xiphinema oxycaudatum (Nematoda, Dorylaimidae) from South Africa
title_full_unstemmed First report and molecular characterization of the dagger nematode, Xiphinema oxycaudatum (Nematoda, Dorylaimidae) from South Africa
title_sort first report and molecular characterization of the dagger nematode, xiphinema oxycaudatum (nematoda, dorylaimidae) from south africa
publisher Pensoft Publishers
series ZooKeys
issn 1313-2989
1313-2970
publishDate 2019-12-01
description Plant-parasitic nematodes of the genus Xiphinema Cobb, 1913 comprise a complex group of nematode species, some of which are important vectors of plant viruses. During a field survey to determine the soil health of an abandoned honeybush (Cyclopia genistoides) monoculture, a high density of the dagger nematode, Xiphinema oxycaudatum Lamberti & Bleve-Zacheo, 1979 (Nematoda, Dorylaimidae), was observed in soil around the roots of honeybush plants in an abandoned farmland at Bereaville, an old mission station in the Western Cape province of South Africa. Soil samples were taken from the rhizosphere of plants and nematodes were extracted from the soil using a modified extraction tray method. Specimen of the dagger nematodes were processed for scanning electron microscopy, morphological and molecular analysis. Molecular profiling of the nematode species was done in order to give an accurate diagnosis and to effectively discriminate the nematode from other species within the Xiphinema americanum group. Phylogenetic analysis based on the D2D3 expansion segment of the 28S gene supported a close relationship of species within the americanum group, however, the protein-coding cytochrome oxidase (coxI) of the mitochondrial gene provided a useful tool for distinguishing the nematode from other species within the group. This study represents the first report of X. oxycaudatum from South Africa.
url https://zookeys.pensoft.net/article/35281/download/pdf/
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