Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits
Precise physiological and molecular marker-based assessment provides information about the extent of genetic diversity, which helps for effective breeding programmes. We have conducted detailed physiological and molecular marker-based assessment of selected eight indigenous rice landraces from Korap...
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doaj-1ffb8a02ca754b119af9119d7d2fa0ae2020-11-25T01:44:04ZengElsevierData in Brief2352-34092019-08-0125Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traitsDebabrata Panda0Swati S. Mishra1Sangram K. Mohanty2Prafulla K. Behera3Sangram K. Lenka4Department of Biodiversity and Conservation of Natural Resources, Central University of Orissa, Koraput, 764 021, Odisha, India; Corresponding author.Department of Biodiversity and Conservation of Natural Resources, Central University of Orissa, Koraput, 764 021, Odisha, IndiaNational Rice Research Institute (ICAR), Cuttack, 753 006, Odisha, IndiaDepartment of Biodiversity and Conservation of Natural Resources, Central University of Orissa, Koraput, 764 021, Odisha, IndiaTERI-Deakin NanoBiotechnology Centre, The Energy and Resources Institute, Gurugram, Haryana, 122 001, IndiaPrecise physiological and molecular marker-based assessment provides information about the extent of genetic diversity, which helps for effective breeding programmes. We have conducted detailed physiological and molecular marker-based assessment of selected eight indigenous rice landraces from Koraput, India along with tolerant (N22) and susceptible (IR64) check varieties under control and simulated drought stress using polyethylene glycol (PEG) 6000. After exposure to different levels of drought stress, relative germination performance (RGP), seedling vigour index (SVI) and relative growth index (RGI) were significantly declined in all the rice landraces compared to the control plants and significant varietal differences were observed. Genetic relationship among the studied rice landraces was assessed with 24 previously reported drought tolerance linked Simple Sequence Repeat (SSR) markers. A total of 53 alleles were detected at the loci of the 24 markers across the 10 rice accessions. The Nei's gene diversity (He) and the polymorphism information content (PIC) ranged from 0 to 0.665 and 0 to 0.687, respectively. Six SSR loci, RM276, RM411, RM3, RM263, RM216 and RM28199, provided the highest PIC values and are potential for exploring the genetic diversity of studied rice lines for drought tolerance. Four rice genotypes (Butkichudi, Haldichudi, Machakanta and Kalajeera) showed the highest genetic distance with tolerant check variety (N22) and can be considered as valuable genetic resources for drought breeding program. Keywords: Drought tolerance, Indigenous rice, Simple sequence repeat, Microsatellite panelhttp://www.sciencedirect.com/science/article/pii/S2352340919307176 |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Debabrata Panda Swati S. Mishra Sangram K. Mohanty Prafulla K. Behera Sangram K. Lenka |
spellingShingle |
Debabrata Panda Swati S. Mishra Sangram K. Mohanty Prafulla K. Behera Sangram K. Lenka Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits Data in Brief |
author_facet |
Debabrata Panda Swati S. Mishra Sangram K. Mohanty Prafulla K. Behera Sangram K. Lenka |
author_sort |
Debabrata Panda |
title |
Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits |
title_short |
Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits |
title_full |
Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits |
title_fullStr |
Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits |
title_full_unstemmed |
Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits |
title_sort |
data on genetic potentiality of folk rice (oryza sativa l.) genotypes from koraput, india in reference to drought tolerance traits |
publisher |
Elsevier |
series |
Data in Brief |
issn |
2352-3409 |
publishDate |
2019-08-01 |
description |
Precise physiological and molecular marker-based assessment provides information about the extent of genetic diversity, which helps for effective breeding programmes. We have conducted detailed physiological and molecular marker-based assessment of selected eight indigenous rice landraces from Koraput, India along with tolerant (N22) and susceptible (IR64) check varieties under control and simulated drought stress using polyethylene glycol (PEG) 6000. After exposure to different levels of drought stress, relative germination performance (RGP), seedling vigour index (SVI) and relative growth index (RGI) were significantly declined in all the rice landraces compared to the control plants and significant varietal differences were observed. Genetic relationship among the studied rice landraces was assessed with 24 previously reported drought tolerance linked Simple Sequence Repeat (SSR) markers. A total of 53 alleles were detected at the loci of the 24 markers across the 10 rice accessions. The Nei's gene diversity (He) and the polymorphism information content (PIC) ranged from 0 to 0.665 and 0 to 0.687, respectively. Six SSR loci, RM276, RM411, RM3, RM263, RM216 and RM28199, provided the highest PIC values and are potential for exploring the genetic diversity of studied rice lines for drought tolerance. Four rice genotypes (Butkichudi, Haldichudi, Machakanta and Kalajeera) showed the highest genetic distance with tolerant check variety (N22) and can be considered as valuable genetic resources for drought breeding program. Keywords: Drought tolerance, Indigenous rice, Simple sequence repeat, Microsatellite panel |
url |
http://www.sciencedirect.com/science/article/pii/S2352340919307176 |
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