Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits

Precise physiological and molecular marker-based assessment provides information about the extent of genetic diversity, which helps for effective breeding programmes. We have conducted detailed physiological and molecular marker-based assessment of selected eight indigenous rice landraces from Korap...

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Main Authors: Debabrata Panda, Swati S. Mishra, Sangram K. Mohanty, Prafulla K. Behera, Sangram K. Lenka
Format: Article
Language:English
Published: Elsevier 2019-08-01
Series:Data in Brief
Online Access:http://www.sciencedirect.com/science/article/pii/S2352340919307176
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spelling doaj-1ffb8a02ca754b119af9119d7d2fa0ae2020-11-25T01:44:04ZengElsevierData in Brief2352-34092019-08-0125Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traitsDebabrata Panda0Swati S. Mishra1Sangram K. Mohanty2Prafulla K. Behera3Sangram K. Lenka4Department of Biodiversity and Conservation of Natural Resources, Central University of Orissa, Koraput, 764 021, Odisha, India; Corresponding author.Department of Biodiversity and Conservation of Natural Resources, Central University of Orissa, Koraput, 764 021, Odisha, IndiaNational Rice Research Institute (ICAR), Cuttack, 753 006, Odisha, IndiaDepartment of Biodiversity and Conservation of Natural Resources, Central University of Orissa, Koraput, 764 021, Odisha, IndiaTERI-Deakin NanoBiotechnology Centre, The Energy and Resources Institute, Gurugram, Haryana, 122 001, IndiaPrecise physiological and molecular marker-based assessment provides information about the extent of genetic diversity, which helps for effective breeding programmes. We have conducted detailed physiological and molecular marker-based assessment of selected eight indigenous rice landraces from Koraput, India along with tolerant (N22) and susceptible (IR64) check varieties under control and simulated drought stress using polyethylene glycol (PEG) 6000. After exposure to different levels of drought stress, relative germination performance (RGP), seedling vigour index (SVI) and relative growth index (RGI) were significantly declined in all the rice landraces compared to the control plants and significant varietal differences were observed. Genetic relationship among the studied rice landraces was assessed with 24 previously reported drought tolerance linked Simple Sequence Repeat (SSR) markers. A total of 53 alleles were detected at the loci of the 24 markers across the 10 rice accessions. The Nei's gene diversity (He) and the polymorphism information content (PIC) ranged from 0 to 0.665 and 0 to 0.687, respectively. Six SSR loci, RM276, RM411, RM3, RM263, RM216 and RM28199, provided the highest PIC values and are potential for exploring the genetic diversity of studied rice lines for drought tolerance. Four rice genotypes (Butkichudi, Haldichudi, Machakanta and Kalajeera) showed the highest genetic distance with tolerant check variety (N22) and can be considered as valuable genetic resources for drought breeding program. Keywords: Drought tolerance, Indigenous rice, Simple sequence repeat, Microsatellite panelhttp://www.sciencedirect.com/science/article/pii/S2352340919307176
collection DOAJ
language English
format Article
sources DOAJ
author Debabrata Panda
Swati S. Mishra
Sangram K. Mohanty
Prafulla K. Behera
Sangram K. Lenka
spellingShingle Debabrata Panda
Swati S. Mishra
Sangram K. Mohanty
Prafulla K. Behera
Sangram K. Lenka
Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits
Data in Brief
author_facet Debabrata Panda
Swati S. Mishra
Sangram K. Mohanty
Prafulla K. Behera
Sangram K. Lenka
author_sort Debabrata Panda
title Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits
title_short Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits
title_full Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits
title_fullStr Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits
title_full_unstemmed Data on genetic potentiality of folk rice (Oryza sativa L.) genotypes from Koraput, India in reference to drought tolerance traits
title_sort data on genetic potentiality of folk rice (oryza sativa l.) genotypes from koraput, india in reference to drought tolerance traits
publisher Elsevier
series Data in Brief
issn 2352-3409
publishDate 2019-08-01
description Precise physiological and molecular marker-based assessment provides information about the extent of genetic diversity, which helps for effective breeding programmes. We have conducted detailed physiological and molecular marker-based assessment of selected eight indigenous rice landraces from Koraput, India along with tolerant (N22) and susceptible (IR64) check varieties under control and simulated drought stress using polyethylene glycol (PEG) 6000. After exposure to different levels of drought stress, relative germination performance (RGP), seedling vigour index (SVI) and relative growth index (RGI) were significantly declined in all the rice landraces compared to the control plants and significant varietal differences were observed. Genetic relationship among the studied rice landraces was assessed with 24 previously reported drought tolerance linked Simple Sequence Repeat (SSR) markers. A total of 53 alleles were detected at the loci of the 24 markers across the 10 rice accessions. The Nei's gene diversity (He) and the polymorphism information content (PIC) ranged from 0 to 0.665 and 0 to 0.687, respectively. Six SSR loci, RM276, RM411, RM3, RM263, RM216 and RM28199, provided the highest PIC values and are potential for exploring the genetic diversity of studied rice lines for drought tolerance. Four rice genotypes (Butkichudi, Haldichudi, Machakanta and Kalajeera) showed the highest genetic distance with tolerant check variety (N22) and can be considered as valuable genetic resources for drought breeding program. Keywords: Drought tolerance, Indigenous rice, Simple sequence repeat, Microsatellite panel
url http://www.sciencedirect.com/science/article/pii/S2352340919307176
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