Draft genome and description of Aeromicrobium phoceense strain Marseille-Q0843T sp. nov., a new bacterium isolated from human healthy skin

In 2019, by culturing a skin swab sample from the back of the hand of a 61-year-old healthy woman and assessing it via the culturomics method, we isolated the new bacterial strain Marseille-Q0843T (= CSUR-Q0843). Matrix-assisted desorption ionization–time of flight mass spectrometry (MALDI-TOF MS) f...

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Main Authors: M. Boxberger, M. Ben Khedher, S. Magnien, N. Cassir, B. La Scola
Format: Article
Language:English
Published: Elsevier 2020-11-01
Series:New Microbes and New Infections
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S205229752030161X
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spelling doaj-2177eabfd8e2423b9c61f6916482108e2020-12-27T04:29:36ZengElsevierNew Microbes and New Infections2052-29752020-11-0138100809Draft genome and description of Aeromicrobium phoceense strain Marseille-Q0843T sp. nov., a new bacterium isolated from human healthy skinM. Boxberger0M. Ben Khedher1S. Magnien2N. Cassir3B. La Scola4Aix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France; IHU-Méditerranée Infection, Marseille, FranceAix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France; IHU-Méditerranée Infection, Marseille, FranceAix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France; IHU-Méditerranée Infection, Marseille, FranceAix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France; IHU-Méditerranée Infection, Marseille, FranceAix-Marseille Université, IRD, AP-HM, MEPHI, Marseille, France; IHU-Méditerranée Infection, Marseille, France; Corresponding author: B. La Scola, Méditerranée-Infection, Aix-Marseille Université, 19-21 Boulevard Jean Moulin, 13385, Marseille, cedex 05, France.In 2019, by culturing a skin swab sample from the back of the hand of a 61-year-old healthy woman and assessing it via the culturomics method, we isolated the new bacterial strain Marseille-Q0843T (= CSUR-Q0843). Matrix-assisted desorption ionization–time of flight mass spectrometry (MALDI-TOF MS) failed to identify this isolate. Analysis of the 16S ribosomal RNA gene and genome-to-genome comparison suggested that this taxon belongs to a novel bacterial species within the family in Nocardioidaceae in the phylum Actinobacteria. We describe here the main phenotypic characteristics, genome sequence and annotation of Aeromicrobium phoceense strain Marseille-Q0843T, a new member of the Aeromicrobium genus, which we propose as the type strain.http://www.sciencedirect.com/science/article/pii/S205229752030161XAeromicrobiumculturomicsgenomesp. nov.taxonogenomics
collection DOAJ
language English
format Article
sources DOAJ
author M. Boxberger
M. Ben Khedher
S. Magnien
N. Cassir
B. La Scola
spellingShingle M. Boxberger
M. Ben Khedher
S. Magnien
N. Cassir
B. La Scola
Draft genome and description of Aeromicrobium phoceense strain Marseille-Q0843T sp. nov., a new bacterium isolated from human healthy skin
New Microbes and New Infections
Aeromicrobium
culturomics
genome
sp. nov.
taxonogenomics
author_facet M. Boxberger
M. Ben Khedher
S. Magnien
N. Cassir
B. La Scola
author_sort M. Boxberger
title Draft genome and description of Aeromicrobium phoceense strain Marseille-Q0843T sp. nov., a new bacterium isolated from human healthy skin
title_short Draft genome and description of Aeromicrobium phoceense strain Marseille-Q0843T sp. nov., a new bacterium isolated from human healthy skin
title_full Draft genome and description of Aeromicrobium phoceense strain Marseille-Q0843T sp. nov., a new bacterium isolated from human healthy skin
title_fullStr Draft genome and description of Aeromicrobium phoceense strain Marseille-Q0843T sp. nov., a new bacterium isolated from human healthy skin
title_full_unstemmed Draft genome and description of Aeromicrobium phoceense strain Marseille-Q0843T sp. nov., a new bacterium isolated from human healthy skin
title_sort draft genome and description of aeromicrobium phoceense strain marseille-q0843t sp. nov., a new bacterium isolated from human healthy skin
publisher Elsevier
series New Microbes and New Infections
issn 2052-2975
publishDate 2020-11-01
description In 2019, by culturing a skin swab sample from the back of the hand of a 61-year-old healthy woman and assessing it via the culturomics method, we isolated the new bacterial strain Marseille-Q0843T (= CSUR-Q0843). Matrix-assisted desorption ionization–time of flight mass spectrometry (MALDI-TOF MS) failed to identify this isolate. Analysis of the 16S ribosomal RNA gene and genome-to-genome comparison suggested that this taxon belongs to a novel bacterial species within the family in Nocardioidaceae in the phylum Actinobacteria. We describe here the main phenotypic characteristics, genome sequence and annotation of Aeromicrobium phoceense strain Marseille-Q0843T, a new member of the Aeromicrobium genus, which we propose as the type strain.
topic Aeromicrobium
culturomics
genome
sp. nov.
taxonogenomics
url http://www.sciencedirect.com/science/article/pii/S205229752030161X
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