Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials

HKU1 is a human beta coronavirus and infects host cells via highly glycosylated spike protein (S). The N-glycosylation of HKU1 S has been reported. However, little is known about its O-glycosylation, which hinders the in-depth understanding of its biological functions. Herein, a comprehensive study...

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Main Authors: Yun Cui, Xuefang Dong, Xiaofei Zhang, Cheng Chen, Dongmei Fu, Xiuling Li, Xinmiao Liang
Format: Article
Language:English
Published: Frontiers Media S.A. 2021-08-01
Series:Frontiers in Chemistry
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fchem.2021.707235/full
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spelling doaj-21a09b36658c451ca5d4d7761e35e30e2021-08-13T06:26:49ZengFrontiers Media S.A.Frontiers in Chemistry2296-26462021-08-01910.3389/fchem.2021.707235707235Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography MaterialsYun Cui0Xuefang Dong1Xiaofei Zhang2Cheng Chen3Dongmei Fu4Xiuling Li5Xinmiao Liang6School of Biological Engineering, Dalian Polytechnic University, Dalian, ChinaKey Lab of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, ChinaKey Lab of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, ChinaKey Lab of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, ChinaSchool of Biological Engineering, Dalian Polytechnic University, Dalian, ChinaKey Lab of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, ChinaKey Lab of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, ChinaHKU1 is a human beta coronavirus and infects host cells via highly glycosylated spike protein (S). The N-glycosylation of HKU1 S has been reported. However, little is known about its O-glycosylation, which hinders the in-depth understanding of its biological functions. Herein, a comprehensive study of O-glycosylation of HKU1 S was carried out based on dual-functional histidine-bonded silica (HBS) materials. The enrichment method for O-glycopeptides with HBS was developed and validated using standard proteins. The application of the developed method to the HKU1 S1 subunit resulted in 46 novel O-glycosylation sites, among which 55.6% were predicted to be exposed on the outer protein surface. Moreover, the O-linked glycans and their abundance on each HKU1 S1 site were analyzed. The obtained O-glycosylation dataset will provide valuable insights into the structure of HKU1 S.https://www.frontiersin.org/articles/10.3389/fchem.2021.707235/fullHKU1spike glycoproteinenrichmentO-glycosylation sitesO-glycosylation abundance
collection DOAJ
language English
format Article
sources DOAJ
author Yun Cui
Xuefang Dong
Xiaofei Zhang
Cheng Chen
Dongmei Fu
Xiuling Li
Xinmiao Liang
spellingShingle Yun Cui
Xuefang Dong
Xiaofei Zhang
Cheng Chen
Dongmei Fu
Xiuling Li
Xinmiao Liang
Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials
Frontiers in Chemistry
HKU1
spike glycoprotein
enrichment
O-glycosylation sites
O-glycosylation abundance
author_facet Yun Cui
Xuefang Dong
Xiaofei Zhang
Cheng Chen
Dongmei Fu
Xiuling Li
Xinmiao Liang
author_sort Yun Cui
title Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials
title_short Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials
title_full Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials
title_fullStr Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials
title_full_unstemmed Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials
title_sort deciphering the o-glycosylation of hku1 spike protein with the dual-functional hydrophilic interaction chromatography materials
publisher Frontiers Media S.A.
series Frontiers in Chemistry
issn 2296-2646
publishDate 2021-08-01
description HKU1 is a human beta coronavirus and infects host cells via highly glycosylated spike protein (S). The N-glycosylation of HKU1 S has been reported. However, little is known about its O-glycosylation, which hinders the in-depth understanding of its biological functions. Herein, a comprehensive study of O-glycosylation of HKU1 S was carried out based on dual-functional histidine-bonded silica (HBS) materials. The enrichment method for O-glycopeptides with HBS was developed and validated using standard proteins. The application of the developed method to the HKU1 S1 subunit resulted in 46 novel O-glycosylation sites, among which 55.6% were predicted to be exposed on the outer protein surface. Moreover, the O-linked glycans and their abundance on each HKU1 S1 site were analyzed. The obtained O-glycosylation dataset will provide valuable insights into the structure of HKU1 S.
topic HKU1
spike glycoprotein
enrichment
O-glycosylation sites
O-glycosylation abundance
url https://www.frontiersin.org/articles/10.3389/fchem.2021.707235/full
work_keys_str_mv AT yuncui decipheringtheoglycosylationofhku1spikeproteinwiththedualfunctionalhydrophilicinteractionchromatographymaterials
AT xuefangdong decipheringtheoglycosylationofhku1spikeproteinwiththedualfunctionalhydrophilicinteractionchromatographymaterials
AT xiaofeizhang decipheringtheoglycosylationofhku1spikeproteinwiththedualfunctionalhydrophilicinteractionchromatographymaterials
AT chengchen decipheringtheoglycosylationofhku1spikeproteinwiththedualfunctionalhydrophilicinteractionchromatographymaterials
AT dongmeifu decipheringtheoglycosylationofhku1spikeproteinwiththedualfunctionalhydrophilicinteractionchromatographymaterials
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AT xinmiaoliang decipheringtheoglycosylationofhku1spikeproteinwiththedualfunctionalhydrophilicinteractionchromatographymaterials
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