Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials
HKU1 is a human beta coronavirus and infects host cells via highly glycosylated spike protein (S). The N-glycosylation of HKU1 S has been reported. However, little is known about its O-glycosylation, which hinders the in-depth understanding of its biological functions. Herein, a comprehensive study...
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doaj-21a09b36658c451ca5d4d7761e35e30e2021-08-13T06:26:49ZengFrontiers Media S.A.Frontiers in Chemistry2296-26462021-08-01910.3389/fchem.2021.707235707235Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography MaterialsYun Cui0Xuefang Dong1Xiaofei Zhang2Cheng Chen3Dongmei Fu4Xiuling Li5Xinmiao Liang6School of Biological Engineering, Dalian Polytechnic University, Dalian, ChinaKey Lab of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, ChinaKey Lab of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, ChinaKey Lab of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, ChinaSchool of Biological Engineering, Dalian Polytechnic University, Dalian, ChinaKey Lab of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, ChinaKey Lab of Separation Science for Analytical Chemistry, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, ChinaHKU1 is a human beta coronavirus and infects host cells via highly glycosylated spike protein (S). The N-glycosylation of HKU1 S has been reported. However, little is known about its O-glycosylation, which hinders the in-depth understanding of its biological functions. Herein, a comprehensive study of O-glycosylation of HKU1 S was carried out based on dual-functional histidine-bonded silica (HBS) materials. The enrichment method for O-glycopeptides with HBS was developed and validated using standard proteins. The application of the developed method to the HKU1 S1 subunit resulted in 46 novel O-glycosylation sites, among which 55.6% were predicted to be exposed on the outer protein surface. Moreover, the O-linked glycans and their abundance on each HKU1 S1 site were analyzed. The obtained O-glycosylation dataset will provide valuable insights into the structure of HKU1 S.https://www.frontiersin.org/articles/10.3389/fchem.2021.707235/fullHKU1spike glycoproteinenrichmentO-glycosylation sitesO-glycosylation abundance |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Yun Cui Xuefang Dong Xiaofei Zhang Cheng Chen Dongmei Fu Xiuling Li Xinmiao Liang |
spellingShingle |
Yun Cui Xuefang Dong Xiaofei Zhang Cheng Chen Dongmei Fu Xiuling Li Xinmiao Liang Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials Frontiers in Chemistry HKU1 spike glycoprotein enrichment O-glycosylation sites O-glycosylation abundance |
author_facet |
Yun Cui Xuefang Dong Xiaofei Zhang Cheng Chen Dongmei Fu Xiuling Li Xinmiao Liang |
author_sort |
Yun Cui |
title |
Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials |
title_short |
Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials |
title_full |
Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials |
title_fullStr |
Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials |
title_full_unstemmed |
Deciphering the O-Glycosylation of HKU1 Spike Protein With the Dual-Functional Hydrophilic Interaction Chromatography Materials |
title_sort |
deciphering the o-glycosylation of hku1 spike protein with the dual-functional hydrophilic interaction chromatography materials |
publisher |
Frontiers Media S.A. |
series |
Frontiers in Chemistry |
issn |
2296-2646 |
publishDate |
2021-08-01 |
description |
HKU1 is a human beta coronavirus and infects host cells via highly glycosylated spike protein (S). The N-glycosylation of HKU1 S has been reported. However, little is known about its O-glycosylation, which hinders the in-depth understanding of its biological functions. Herein, a comprehensive study of O-glycosylation of HKU1 S was carried out based on dual-functional histidine-bonded silica (HBS) materials. The enrichment method for O-glycopeptides with HBS was developed and validated using standard proteins. The application of the developed method to the HKU1 S1 subunit resulted in 46 novel O-glycosylation sites, among which 55.6% were predicted to be exposed on the outer protein surface. Moreover, the O-linked glycans and their abundance on each HKU1 S1 site were analyzed. The obtained O-glycosylation dataset will provide valuable insights into the structure of HKU1 S. |
topic |
HKU1 spike glycoprotein enrichment O-glycosylation sites O-glycosylation abundance |
url |
https://www.frontiersin.org/articles/10.3389/fchem.2021.707235/full |
work_keys_str_mv |
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