Relationship between Single Nucleotide Polymorphisms in the Peroxisome Proliferator-Activated Receptor Gamma Gene and Fatty Acid Composition in Korean Native Cattle

The peroxisome proliferator-activated receptor gamma (PPARγ) gene plays an important role in the biosynthesis process controlled by a number of fatty acid transcription factors. This study investigates the relationships between 130 single-nucleotide polymorphisms (SNPs) in the PPARγ gene and the fat...

Full description

Bibliographic Details
Main Authors: Jea-young Lee, Jae-jung Ha, Yong-soo Park, Jun-koo Yi, Seunguk Lee, Seyoung Mun, Kyudong Han, J.-J. Kim, Hyun-Ji Kim, Dong-yep Oh
Format: Article
Language:English
Published: Asian-Australasian Association of Animal Production Societies 2016-02-01
Series:Asian-Australasian Journal of Animal Sciences
Subjects:
SNP
Online Access:http://www.ajas.info/upload/pdf/ajas-29-2-184.pdf
id doaj-21c13a5888294cd8b2fdbaa92bd5a99d
record_format Article
spelling doaj-21c13a5888294cd8b2fdbaa92bd5a99d2020-11-25T01:30:46ZengAsian-Australasian Association of Animal Production SocietiesAsian-Australasian Journal of Animal Sciences1011-23671976-55172016-02-0129218419410.5713/ajas.15.050223350Relationship between Single Nucleotide Polymorphisms in the Peroxisome Proliferator-Activated Receptor Gamma Gene and Fatty Acid Composition in Korean Native CattleJea-young LeeJae-jung Ha0Yong-soo Park1Jun-koo Yi2Seunguk Lee3Seyoung Mun4Kyudong Han5J.-J. Kim6Hyun-Ji KimDong-yep Oh7 Livestock Research institute, Yeongju 750-871, .Korea Department of Equine Industry, Korea National College of Agriculture and Fisheries, Hwaseong 445-760, .Korea Livestock Research institute, Yeongju 750-871, .Korea Biotechnology Research Center, The University of Tokyo, Bunkyo 113-8657, .Tokyo Department of Nanobiomedical Science & BK21 PLUS NBM Global Research Center for Regenerative Medicine, Dankook University, Cheonan 330-714, .Korea Department of Nanobiomedical Science & BK21 PLUS NBM Global Research Center for Regenerative Medicine, Dankook University, Cheonan 330-714, .Korea School of Biotechnology, Yeungnam University, Gyeongsan 712-749, .Korea Livestock Research institute, Yeongju 750-871, .KoreaThe peroxisome proliferator-activated receptor gamma (PPARγ) gene plays an important role in the biosynthesis process controlled by a number of fatty acid transcription factors. This study investigates the relationships between 130 single-nucleotide polymorphisms (SNPs) in the PPARγ gene and the fatty acid composition of muscle fat in the commercial population of Korean native cattle. We identified 38 SNPs and verified relationships between 3 SNPs (g.1159-71208 A>G, g.42555-29812 G>A, and g.72362 G>T) and the fatty acid composition of commercial Korean native cattle (n = 513). Cattle with the AA genotype of g.1159-71208 A>G and the GG genotype of g.42555-29812 G>A and g.72362 G>T had higher levels of monounsaturated fatty acids and carcass traits (p<0.05). The results revealed that the 3 identified SNPs in the PPARγ gene affected fatty acid composition and carcass traits, suggesting that these 3 SNPs may improve the flavor and quality of beef in commercial Korean native cattle.http://www.ajas.info/upload/pdf/ajas-29-2-184.pdfKorean Native CattleSNPFatty Acid CompositionMarbling Score
collection DOAJ
language English
format Article
sources DOAJ
author Jea-young Lee
Jae-jung Ha
Yong-soo Park
Jun-koo Yi
Seunguk Lee
Seyoung Mun
Kyudong Han
J.-J. Kim
Hyun-Ji Kim
Dong-yep Oh
spellingShingle Jea-young Lee
Jae-jung Ha
Yong-soo Park
Jun-koo Yi
Seunguk Lee
Seyoung Mun
Kyudong Han
J.-J. Kim
Hyun-Ji Kim
Dong-yep Oh
Relationship between Single Nucleotide Polymorphisms in the Peroxisome Proliferator-Activated Receptor Gamma Gene and Fatty Acid Composition in Korean Native Cattle
Asian-Australasian Journal of Animal Sciences
Korean Native Cattle
SNP
Fatty Acid Composition
Marbling Score
author_facet Jea-young Lee
Jae-jung Ha
Yong-soo Park
Jun-koo Yi
Seunguk Lee
Seyoung Mun
Kyudong Han
J.-J. Kim
Hyun-Ji Kim
Dong-yep Oh
author_sort Jea-young Lee
title Relationship between Single Nucleotide Polymorphisms in the Peroxisome Proliferator-Activated Receptor Gamma Gene and Fatty Acid Composition in Korean Native Cattle
title_short Relationship between Single Nucleotide Polymorphisms in the Peroxisome Proliferator-Activated Receptor Gamma Gene and Fatty Acid Composition in Korean Native Cattle
title_full Relationship between Single Nucleotide Polymorphisms in the Peroxisome Proliferator-Activated Receptor Gamma Gene and Fatty Acid Composition in Korean Native Cattle
title_fullStr Relationship between Single Nucleotide Polymorphisms in the Peroxisome Proliferator-Activated Receptor Gamma Gene and Fatty Acid Composition in Korean Native Cattle
title_full_unstemmed Relationship between Single Nucleotide Polymorphisms in the Peroxisome Proliferator-Activated Receptor Gamma Gene and Fatty Acid Composition in Korean Native Cattle
title_sort relationship between single nucleotide polymorphisms in the peroxisome proliferator-activated receptor gamma gene and fatty acid composition in korean native cattle
publisher Asian-Australasian Association of Animal Production Societies
series Asian-Australasian Journal of Animal Sciences
issn 1011-2367
1976-5517
publishDate 2016-02-01
description The peroxisome proliferator-activated receptor gamma (PPARγ) gene plays an important role in the biosynthesis process controlled by a number of fatty acid transcription factors. This study investigates the relationships between 130 single-nucleotide polymorphisms (SNPs) in the PPARγ gene and the fatty acid composition of muscle fat in the commercial population of Korean native cattle. We identified 38 SNPs and verified relationships between 3 SNPs (g.1159-71208 A>G, g.42555-29812 G>A, and g.72362 G>T) and the fatty acid composition of commercial Korean native cattle (n = 513). Cattle with the AA genotype of g.1159-71208 A>G and the GG genotype of g.42555-29812 G>A and g.72362 G>T had higher levels of monounsaturated fatty acids and carcass traits (p<0.05). The results revealed that the 3 identified SNPs in the PPARγ gene affected fatty acid composition and carcass traits, suggesting that these 3 SNPs may improve the flavor and quality of beef in commercial Korean native cattle.
topic Korean Native Cattle
SNP
Fatty Acid Composition
Marbling Score
url http://www.ajas.info/upload/pdf/ajas-29-2-184.pdf
work_keys_str_mv AT jeayounglee relationshipbetweensinglenucleotidepolymorphismsintheperoxisomeproliferatoractivatedreceptorgammageneandfattyacidcompositioninkoreannativecattle
AT jaejungha relationshipbetweensinglenucleotidepolymorphismsintheperoxisomeproliferatoractivatedreceptorgammageneandfattyacidcompositioninkoreannativecattle
AT yongsoopark relationshipbetweensinglenucleotidepolymorphismsintheperoxisomeproliferatoractivatedreceptorgammageneandfattyacidcompositioninkoreannativecattle
AT junkooyi relationshipbetweensinglenucleotidepolymorphismsintheperoxisomeproliferatoractivatedreceptorgammageneandfattyacidcompositioninkoreannativecattle
AT seunguklee relationshipbetweensinglenucleotidepolymorphismsintheperoxisomeproliferatoractivatedreceptorgammageneandfattyacidcompositioninkoreannativecattle
AT seyoungmun relationshipbetweensinglenucleotidepolymorphismsintheperoxisomeproliferatoractivatedreceptorgammageneandfattyacidcompositioninkoreannativecattle
AT kyudonghan relationshipbetweensinglenucleotidepolymorphismsintheperoxisomeproliferatoractivatedreceptorgammageneandfattyacidcompositioninkoreannativecattle
AT jjkim relationshipbetweensinglenucleotidepolymorphismsintheperoxisomeproliferatoractivatedreceptorgammageneandfattyacidcompositioninkoreannativecattle
AT hyunjikim relationshipbetweensinglenucleotidepolymorphismsintheperoxisomeproliferatoractivatedreceptorgammageneandfattyacidcompositioninkoreannativecattle
AT dongyepoh relationshipbetweensinglenucleotidepolymorphismsintheperoxisomeproliferatoractivatedreceptorgammageneandfattyacidcompositioninkoreannativecattle
_version_ 1725090048336986112