Mechanism of Xuebijing injection on hepatic ischemia-reperfusion injury based on network pharmacology

Objective: Using network pharmacology to predict the main active ingredients, targets and signaling pathways of Xuebijing injection in the treatment of hepatic ischemia-reperfusion injury and explore its potential mechanism of action. Methods: Screen the active ingredients and their targets of Da...

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Main Authors: Yuan-Yuan Ding, Xuan Wang
Format: Article
Language:English
Published: Editorial Board of Journal of Hainan Medical University 2021-02-01
Series:Journal of Hainan Medical University
Subjects:
Online Access:http://www.hnykdxxb.com/PDF/202103/09.pdf
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spelling doaj-21e5755080b345eb8fb7f961444622772021-03-04T08:16:17ZengEditorial Board of Journal of Hainan Medical UniversityJournal of Hainan Medical University1007-12371007-12372021-02-012734451Mechanism of Xuebijing injection on hepatic ischemia-reperfusion injury based on network pharmacologyYuan-Yuan Ding0Xuan Wang1Affiliated 81st Hospital's of Nanjing University of Chinese Medicine, Nanjing 210002, ChinaDepartment of General Surgery, General Hospital of Eastern Theater Command, PLA, Nanjing 210002, ChinaObjective: Using network pharmacology to predict the main active ingredients, targets and signaling pathways of Xuebijing injection in the treatment of hepatic ischemia-reperfusion injury and explore its potential mechanism of action. Methods: Screen the active ingredients and their targets of Danshen, Honghua, Chishao, Chuanxiong, and Danggui in Xuebijing injection through Traditional Chinese Medicine Systems Pharmacology (TCMSP) database and the Hepatic ischemia-reperfusion injury related targets through Online Mendelian Inheritance in Man (OMIM) and GeneCards Suite (The Human Gene Database) database. And acquire drug-disease intersection targets at the same time.The STRING database was used to construct a protein-protein interaction (PPI) network and topologically screen the central targets. Use the R language online search Bioconductor platform to perform GO function enrichment on the target; Database for Annotation, Visualization and Integrated Discovery (DAVID) database was used to perform KEGG channel enrichment analysis on the target. Use Cytoscape 3.7.2 to construct a " ingredient-target-pathway " network diagram and perform a topology analysis. Results: A total of 115 active ingredients were selected from Xuebijing injection, including Quercetin, Luteolin, Kaempferol, Beta-carotene, and Tanshinone IIa ,etc. It corresponds to 217 targets. There are 1057 disease-related targets, and 114 drug-disease common targets. PPI topologically screened out 17 target proteins. Topological analysis of the network graph obtained 15 target genes. Thire intersection contains key targets such as JUN, PPARG, PTGS2, AKT1 and MAPK1. A total of 137 related signaling pathways were obtained by GO enrichment analysis. A total of 8 signaling pathways were obtained through KEGG enrichment (P <0.05, FDR <0.05), among which signaling pathways such as Toll-like receptors, T cell receptors, NOD-like receptors, VEGF, and ErbB played an important role in immune regulation, anti-apoptosis, anti-inflammatory, anti-oxidation, and promoting angiogenesis in the treatment. Conclusion: Xuebijing injection can treat hepatic ischemia-reperfusion injury through multiple components, multiple targets and multiple pathways.http://www.hnykdxxb.com/PDF/202103/09.pdfnetwork pharmacologyxuebijing injectionhepatic ischemia-reperfusion injurymechanism of action
collection DOAJ
language English
format Article
sources DOAJ
author Yuan-Yuan Ding
Xuan Wang
spellingShingle Yuan-Yuan Ding
Xuan Wang
Mechanism of Xuebijing injection on hepatic ischemia-reperfusion injury based on network pharmacology
Journal of Hainan Medical University
network pharmacology
xuebijing injection
hepatic ischemia-reperfusion injury
mechanism of action
author_facet Yuan-Yuan Ding
Xuan Wang
author_sort Yuan-Yuan Ding
title Mechanism of Xuebijing injection on hepatic ischemia-reperfusion injury based on network pharmacology
title_short Mechanism of Xuebijing injection on hepatic ischemia-reperfusion injury based on network pharmacology
title_full Mechanism of Xuebijing injection on hepatic ischemia-reperfusion injury based on network pharmacology
title_fullStr Mechanism of Xuebijing injection on hepatic ischemia-reperfusion injury based on network pharmacology
title_full_unstemmed Mechanism of Xuebijing injection on hepatic ischemia-reperfusion injury based on network pharmacology
title_sort mechanism of xuebijing injection on hepatic ischemia-reperfusion injury based on network pharmacology
publisher Editorial Board of Journal of Hainan Medical University
series Journal of Hainan Medical University
issn 1007-1237
1007-1237
publishDate 2021-02-01
description Objective: Using network pharmacology to predict the main active ingredients, targets and signaling pathways of Xuebijing injection in the treatment of hepatic ischemia-reperfusion injury and explore its potential mechanism of action. Methods: Screen the active ingredients and their targets of Danshen, Honghua, Chishao, Chuanxiong, and Danggui in Xuebijing injection through Traditional Chinese Medicine Systems Pharmacology (TCMSP) database and the Hepatic ischemia-reperfusion injury related targets through Online Mendelian Inheritance in Man (OMIM) and GeneCards Suite (The Human Gene Database) database. And acquire drug-disease intersection targets at the same time.The STRING database was used to construct a protein-protein interaction (PPI) network and topologically screen the central targets. Use the R language online search Bioconductor platform to perform GO function enrichment on the target; Database for Annotation, Visualization and Integrated Discovery (DAVID) database was used to perform KEGG channel enrichment analysis on the target. Use Cytoscape 3.7.2 to construct a " ingredient-target-pathway " network diagram and perform a topology analysis. Results: A total of 115 active ingredients were selected from Xuebijing injection, including Quercetin, Luteolin, Kaempferol, Beta-carotene, and Tanshinone IIa ,etc. It corresponds to 217 targets. There are 1057 disease-related targets, and 114 drug-disease common targets. PPI topologically screened out 17 target proteins. Topological analysis of the network graph obtained 15 target genes. Thire intersection contains key targets such as JUN, PPARG, PTGS2, AKT1 and MAPK1. A total of 137 related signaling pathways were obtained by GO enrichment analysis. A total of 8 signaling pathways were obtained through KEGG enrichment (P <0.05, FDR <0.05), among which signaling pathways such as Toll-like receptors, T cell receptors, NOD-like receptors, VEGF, and ErbB played an important role in immune regulation, anti-apoptosis, anti-inflammatory, anti-oxidation, and promoting angiogenesis in the treatment. Conclusion: Xuebijing injection can treat hepatic ischemia-reperfusion injury through multiple components, multiple targets and multiple pathways.
topic network pharmacology
xuebijing injection
hepatic ischemia-reperfusion injury
mechanism of action
url http://www.hnykdxxb.com/PDF/202103/09.pdf
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