Turing Instability-Driven Biofabrication of Branching Tissue Structures: A Dynamic Simulation and Analysis Based on the Reaction–Diffusion Mechanism †

Four-dimensional (4D) biofabrication techniques aim to dynamically produce and control three-dimensional (3D) biological structures that would transform their shapes or functionalities with time, when a stimulus is imposed or cell post-printing self-assembly occurs. The evolution of 3D branching pat...

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Main Authors: Xiaolu Zhu, Hao Yang
Format: Article
Language:English
Published: MDPI AG 2018-03-01
Series:Micromachines
Subjects:
Online Access:http://www.mdpi.com/2072-666X/9/3/109
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spelling doaj-233eb1a25aad494bb80d85818af618432020-11-25T00:18:30ZengMDPI AGMicromachines2072-666X2018-03-019310910.3390/mi9030109mi9030109Turing Instability-Driven Biofabrication of Branching Tissue Structures: A Dynamic Simulation and Analysis Based on the Reaction–Diffusion Mechanism †Xiaolu Zhu0Hao Yang1College of Mechanical & Electrical Engineering, Hohai University, Changzhou 213022, Jiangsu, ChinaCollege of Mechanical & Electrical Engineering, Hohai University, Changzhou 213022, Jiangsu, ChinaFour-dimensional (4D) biofabrication techniques aim to dynamically produce and control three-dimensional (3D) biological structures that would transform their shapes or functionalities with time, when a stimulus is imposed or cell post-printing self-assembly occurs. The evolution of 3D branching patterns via self-assembly of cells is critical for the 4D biofabrication of artificial organs or tissues with branched geometry. However, it is still unclear how the formation and evolution of these branching patterns are biologically encoded. Here, we study the biofabrication of lung branching structures utilizing a simulation model based on Turing instability that raises a dynamic reaction–diffusion (RD) process of the biomolecules and cells. The simulation model incorporates partial differential equations of four variables, describing the tempo-spatial distribution of the variables in 3D over time. The simulation results present the formation and evolution process of 3D branching patterns over time and also interpret both the behaviors of side-branching and tip-splitting as the stalk grows and the fabrication style under an external concentration gradient of morphogen, through 3D visualization. This provides a theoretical framework for rationally guiding the 4D biofabrication of lung airway grafts via cellular self-organization, which would potentially reduce the complexity of future experimental research and number of trials.http://www.mdpi.com/2072-666X/9/3/109reaction–diffusion mechanism4D biofabrication3D morphogenesisself-organization of cells
collection DOAJ
language English
format Article
sources DOAJ
author Xiaolu Zhu
Hao Yang
spellingShingle Xiaolu Zhu
Hao Yang
Turing Instability-Driven Biofabrication of Branching Tissue Structures: A Dynamic Simulation and Analysis Based on the Reaction–Diffusion Mechanism †
Micromachines
reaction–diffusion mechanism
4D biofabrication
3D morphogenesis
self-organization of cells
author_facet Xiaolu Zhu
Hao Yang
author_sort Xiaolu Zhu
title Turing Instability-Driven Biofabrication of Branching Tissue Structures: A Dynamic Simulation and Analysis Based on the Reaction–Diffusion Mechanism †
title_short Turing Instability-Driven Biofabrication of Branching Tissue Structures: A Dynamic Simulation and Analysis Based on the Reaction–Diffusion Mechanism †
title_full Turing Instability-Driven Biofabrication of Branching Tissue Structures: A Dynamic Simulation and Analysis Based on the Reaction–Diffusion Mechanism †
title_fullStr Turing Instability-Driven Biofabrication of Branching Tissue Structures: A Dynamic Simulation and Analysis Based on the Reaction–Diffusion Mechanism †
title_full_unstemmed Turing Instability-Driven Biofabrication of Branching Tissue Structures: A Dynamic Simulation and Analysis Based on the Reaction–Diffusion Mechanism †
title_sort turing instability-driven biofabrication of branching tissue structures: a dynamic simulation and analysis based on the reaction–diffusion mechanism †
publisher MDPI AG
series Micromachines
issn 2072-666X
publishDate 2018-03-01
description Four-dimensional (4D) biofabrication techniques aim to dynamically produce and control three-dimensional (3D) biological structures that would transform their shapes or functionalities with time, when a stimulus is imposed or cell post-printing self-assembly occurs. The evolution of 3D branching patterns via self-assembly of cells is critical for the 4D biofabrication of artificial organs or tissues with branched geometry. However, it is still unclear how the formation and evolution of these branching patterns are biologically encoded. Here, we study the biofabrication of lung branching structures utilizing a simulation model based on Turing instability that raises a dynamic reaction–diffusion (RD) process of the biomolecules and cells. The simulation model incorporates partial differential equations of four variables, describing the tempo-spatial distribution of the variables in 3D over time. The simulation results present the formation and evolution process of 3D branching patterns over time and also interpret both the behaviors of side-branching and tip-splitting as the stalk grows and the fabrication style under an external concentration gradient of morphogen, through 3D visualization. This provides a theoretical framework for rationally guiding the 4D biofabrication of lung airway grafts via cellular self-organization, which would potentially reduce the complexity of future experimental research and number of trials.
topic reaction–diffusion mechanism
4D biofabrication
3D morphogenesis
self-organization of cells
url http://www.mdpi.com/2072-666X/9/3/109
work_keys_str_mv AT xiaoluzhu turinginstabilitydrivenbiofabricationofbranchingtissuestructuresadynamicsimulationandanalysisbasedonthereactiondiffusionmechanism
AT haoyang turinginstabilitydrivenbiofabricationofbranchingtissuestructuresadynamicsimulationandanalysisbasedonthereactiondiffusionmechanism
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