Molecular identification of some earthworm species (Annelida; Oligochaeta) In Kurdistan-Iraq

A total of 256 specimens of earthworms were collected from four provinces in Kurdistan region of Iraq includes Erbil, Sulaymaniyah, Duhok and Halabja, during a period from July 2018 to April 2019. DNA barcoding was used for the first time in Iraq for identification of earthworms to species level....

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Main Authors: Hawre Othman, Sherwan Taeb Ahmad
Format: Article
Language:English
Published: Salahaddin University-Erbil 2020-12-01
Series:Zanco Journal of Pure and Applied Sciences
Subjects:
coi
Online Access:https://zancojournals.su.edu.krd/index.php/JPAS/article/view/3523
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spelling doaj-2367f0de6636409284027381aeab46822021-01-18T07:39:51ZengSalahaddin University-ErbilZanco Journal of Pure and Applied Sciences2218-02302412-39862020-12-0132610.21271/ZJPAS.32.6.5Molecular identification of some earthworm species (Annelida; Oligochaeta) In Kurdistan-IraqHawre Othman0Sherwan Taeb Ahmad1Department of Biology, Collage of Science, Salahaddin University - Erbil, Kurdistan Region, IraqDepartment of Biology, Collage of Science, Salahaddin University - Erbil, Kurdistan Region, IraqA total of 256 specimens of earthworms were collected from four provinces in Kurdistan region of Iraq includes Erbil, Sulaymaniyah, Duhok and Halabja, during a period from July 2018 to April 2019. DNA barcoding was used for the first time in Iraq for identification of earthworms to species level. A modified CTAB method was used for isolation and extraction of DNA. Mitochondrial COI region was amplified and sequenced to determine the differences among species. Results revealed that six species belong to three genera of two families; Lumbricidae and Megascolecidae were successfully identified and the similarity of all species was 95% or more. which are Amynthas morissi (Beddard, 1892) ; A. luridus (Shen et al., 2019) ; A. gracilis (Kinberg, 1867) ; Aporrectodea trapezoids (Duges, 1828) ; A. longa (Ude, 1888) ; and Healyella syriaca (Rosa, 1893). Depending on the present results the species (Haelyella syriaca, Amynthas gracilis and Amynthas luridus) are considered as new records to Iraqi fauna. The phylogenetic tree analysis using maximum likelihood programs shown that there are seven clades. This study could be a suitable research program for future studies on the earthworms in Iraq.https://zancojournals.su.edu.krd/index.php/JPAS/article/view/3523earthwormscoipcr and sequencing
collection DOAJ
language English
format Article
sources DOAJ
author Hawre Othman
Sherwan Taeb Ahmad
spellingShingle Hawre Othman
Sherwan Taeb Ahmad
Molecular identification of some earthworm species (Annelida; Oligochaeta) In Kurdistan-Iraq
Zanco Journal of Pure and Applied Sciences
earthworms
coi
pcr and sequencing
author_facet Hawre Othman
Sherwan Taeb Ahmad
author_sort Hawre Othman
title Molecular identification of some earthworm species (Annelida; Oligochaeta) In Kurdistan-Iraq
title_short Molecular identification of some earthworm species (Annelida; Oligochaeta) In Kurdistan-Iraq
title_full Molecular identification of some earthworm species (Annelida; Oligochaeta) In Kurdistan-Iraq
title_fullStr Molecular identification of some earthworm species (Annelida; Oligochaeta) In Kurdistan-Iraq
title_full_unstemmed Molecular identification of some earthworm species (Annelida; Oligochaeta) In Kurdistan-Iraq
title_sort molecular identification of some earthworm species (annelida; oligochaeta) in kurdistan-iraq
publisher Salahaddin University-Erbil
series Zanco Journal of Pure and Applied Sciences
issn 2218-0230
2412-3986
publishDate 2020-12-01
description A total of 256 specimens of earthworms were collected from four provinces in Kurdistan region of Iraq includes Erbil, Sulaymaniyah, Duhok and Halabja, during a period from July 2018 to April 2019. DNA barcoding was used for the first time in Iraq for identification of earthworms to species level. A modified CTAB method was used for isolation and extraction of DNA. Mitochondrial COI region was amplified and sequenced to determine the differences among species. Results revealed that six species belong to three genera of two families; Lumbricidae and Megascolecidae were successfully identified and the similarity of all species was 95% or more. which are Amynthas morissi (Beddard, 1892) ; A. luridus (Shen et al., 2019) ; A. gracilis (Kinberg, 1867) ; Aporrectodea trapezoids (Duges, 1828) ; A. longa (Ude, 1888) ; and Healyella syriaca (Rosa, 1893). Depending on the present results the species (Haelyella syriaca, Amynthas gracilis and Amynthas luridus) are considered as new records to Iraqi fauna. The phylogenetic tree analysis using maximum likelihood programs shown that there are seven clades. This study could be a suitable research program for future studies on the earthworms in Iraq.
topic earthworms
coi
pcr and sequencing
url https://zancojournals.su.edu.krd/index.php/JPAS/article/view/3523
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