Environmental Parameters and Substrate Type Drive Microeukaryotic Community Structure During Short-Term Experimental Colonization in Subtropical Eutrophic Freshwaters

Microeukaryotes are key components of aquatic ecosystems and play crucial roles in aquatic food webs. However, influencing factors and potential assembly mechanisms for microeukaryotic community on biofilms are rarely studied. Here, those of microeukaryotic biofilms in subtropical eutrophic freshwat...

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Main Authors: Changyu Zhu, David Bass, Yutao Wang, Zhuo Shen, Weibo Song, Zhenzhen Yi
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-09-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmicb.2020.555795/full
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spelling doaj-25d5dd66be30400ba29c1c3f5eb8614b2020-11-25T03:34:44ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2020-09-011110.3389/fmicb.2020.555795555795Environmental Parameters and Substrate Type Drive Microeukaryotic Community Structure During Short-Term Experimental Colonization in Subtropical Eutrophic FreshwatersChangyu Zhu0Changyu Zhu1Changyu Zhu2David Bass3Yutao Wang4Yutao Wang5Zhuo Shen6Zhuo Shen7Weibo Song8Weibo Song9Zhenzhen Yi10Zhenzhen Yi11Institute of Evolution and Marine Biodiversity, College of Fisheries, Ocean University of China, Qingdao, ChinaPilot National Laboratory for Marine Science and Technology, Qingdao, ChinaGuangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, School of Life Sciences, South China Normal University, Guangzhou, ChinaDepartment of Life Sciences, Natural History Museum, London, United KingdomGuangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, School of Life Sciences, South China Normal University, Guangzhou, ChinaDongli Planting and Farming Industrial Co., Ltd., Lianzhou, ChinaInstitute of Microbial Ecology and Matter Cycle, School of Marine Sciences, Sun Yat-sen University, Zhuhai, ChinaSouthern Marine Science and Engineering Guangdong Laboratory (Zhuhai), Zhuhai, ChinaInstitute of Evolution and Marine Biodiversity, College of Fisheries, Ocean University of China, Qingdao, ChinaPilot National Laboratory for Marine Science and Technology, Qingdao, ChinaPilot National Laboratory for Marine Science and Technology, Qingdao, ChinaGuangzhou Key Laboratory of Subtropical Biodiversity and Biomonitoring, School of Life Sciences, South China Normal University, Guangzhou, ChinaMicroeukaryotes are key components of aquatic ecosystems and play crucial roles in aquatic food webs. However, influencing factors and potential assembly mechanisms for microeukaryotic community on biofilms are rarely studied. Here, those of microeukaryotic biofilms in subtropical eutrophic freshwaters were investigated for the first time based on 2,585 operational taxonomic units (OTUs) from 41 samples, across different environmental conditions and substrate types. Following conclusions were drawn: (1) Environmental parameters were more important than substrate types in structuring microeukaryotic community of biofilms in subtropical eutrophic freshwaters. (2) In the fluctuating river, there was a higher diversity of OTUs and less predictability of community composition than in the stable lake. Sessile species were more likely to be enriched on smooth surfaces of glass slides, while both free-swimming and attached organisms occurred within holes inside PFUs (polyurethane foam units). (3) Both species sorting and neutral process were mechanisms for assembly of microeukaryotic biofilms, but their importance varied depending on different habitats and substrates. (4) The effect of species sorting was slightly higher than the neutral process in river biofilms due to stronger environmental filtering. Species sorting was a stronger force structuring communities on glass slides than PFUs with more niche availability. Our study sheds light on assembly mechanisms for microeukaryotic community on different habitat and substrate types, showing that the resulting communities are determined by both sets of variables, in this case primarily habitat type. The balance of neutral process and species sorting differed between habitats, but the high alpha diversity of microeukaryotes in both led to similar sets of lifecycle traits being selected for in each case.https://www.frontiersin.org/article/10.3389/fmicb.2020.555795/fullbiofilmhabitatmicroeukaryotesneutral processspecies sortingsubstrate
collection DOAJ
language English
format Article
sources DOAJ
author Changyu Zhu
Changyu Zhu
Changyu Zhu
David Bass
Yutao Wang
Yutao Wang
Zhuo Shen
Zhuo Shen
Weibo Song
Weibo Song
Zhenzhen Yi
Zhenzhen Yi
spellingShingle Changyu Zhu
Changyu Zhu
Changyu Zhu
David Bass
Yutao Wang
Yutao Wang
Zhuo Shen
Zhuo Shen
Weibo Song
Weibo Song
Zhenzhen Yi
Zhenzhen Yi
Environmental Parameters and Substrate Type Drive Microeukaryotic Community Structure During Short-Term Experimental Colonization in Subtropical Eutrophic Freshwaters
Frontiers in Microbiology
biofilm
habitat
microeukaryotes
neutral process
species sorting
substrate
author_facet Changyu Zhu
Changyu Zhu
Changyu Zhu
David Bass
Yutao Wang
Yutao Wang
Zhuo Shen
Zhuo Shen
Weibo Song
Weibo Song
Zhenzhen Yi
Zhenzhen Yi
author_sort Changyu Zhu
title Environmental Parameters and Substrate Type Drive Microeukaryotic Community Structure During Short-Term Experimental Colonization in Subtropical Eutrophic Freshwaters
title_short Environmental Parameters and Substrate Type Drive Microeukaryotic Community Structure During Short-Term Experimental Colonization in Subtropical Eutrophic Freshwaters
title_full Environmental Parameters and Substrate Type Drive Microeukaryotic Community Structure During Short-Term Experimental Colonization in Subtropical Eutrophic Freshwaters
title_fullStr Environmental Parameters and Substrate Type Drive Microeukaryotic Community Structure During Short-Term Experimental Colonization in Subtropical Eutrophic Freshwaters
title_full_unstemmed Environmental Parameters and Substrate Type Drive Microeukaryotic Community Structure During Short-Term Experimental Colonization in Subtropical Eutrophic Freshwaters
title_sort environmental parameters and substrate type drive microeukaryotic community structure during short-term experimental colonization in subtropical eutrophic freshwaters
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2020-09-01
description Microeukaryotes are key components of aquatic ecosystems and play crucial roles in aquatic food webs. However, influencing factors and potential assembly mechanisms for microeukaryotic community on biofilms are rarely studied. Here, those of microeukaryotic biofilms in subtropical eutrophic freshwaters were investigated for the first time based on 2,585 operational taxonomic units (OTUs) from 41 samples, across different environmental conditions and substrate types. Following conclusions were drawn: (1) Environmental parameters were more important than substrate types in structuring microeukaryotic community of biofilms in subtropical eutrophic freshwaters. (2) In the fluctuating river, there was a higher diversity of OTUs and less predictability of community composition than in the stable lake. Sessile species were more likely to be enriched on smooth surfaces of glass slides, while both free-swimming and attached organisms occurred within holes inside PFUs (polyurethane foam units). (3) Both species sorting and neutral process were mechanisms for assembly of microeukaryotic biofilms, but their importance varied depending on different habitats and substrates. (4) The effect of species sorting was slightly higher than the neutral process in river biofilms due to stronger environmental filtering. Species sorting was a stronger force structuring communities on glass slides than PFUs with more niche availability. Our study sheds light on assembly mechanisms for microeukaryotic community on different habitat and substrate types, showing that the resulting communities are determined by both sets of variables, in this case primarily habitat type. The balance of neutral process and species sorting differed between habitats, but the high alpha diversity of microeukaryotes in both led to similar sets of lifecycle traits being selected for in each case.
topic biofilm
habitat
microeukaryotes
neutral process
species sorting
substrate
url https://www.frontiersin.org/article/10.3389/fmicb.2020.555795/full
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