Phenotypic characterization of Nocardia spp. isolated from Iran soil microflora

Aims: The present study was conducted to identify Nocardia spp. from Iran soil by various phenotypic tests. Materials and Methods: A total of 300 soil samples were collected of five different geographical regions in Iran. Nocardia isolation was performed by paraffin baiting technique. The colonies...

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Main Authors: Shadi Habibnia, Masoumeh Rasouli Nasab, Parvin Heidarieh, Mehdi Fatahi Bafghi, Mohammad Reza Pourmand, Seyyed Saeed Eshraghi
Format: Article
Language:English
Published: Wolters Kluwer Medknow Publications 2015-01-01
Series:International Journal of Environmental Health Engineering
Subjects:
Online Access:http://www.ijehe.org/article.asp?issn=2277-9183;year=2015;volume=4;issue=1;spage=20;epage=20;aulast=Habibnia
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spelling doaj-2694e50a43ee418db53250b89fd6bb7c2020-11-25T00:40:37ZengWolters Kluwer Medknow PublicationsInternational Journal of Environmental Health Engineering 2277-91832015-01-0141202010.4103/2277-9183.158388Phenotypic characterization of Nocardia spp. isolated from Iran soil microfloraShadi HabibniaMasoumeh Rasouli NasabParvin HeidariehMehdi Fatahi BafghiMohammad Reza PourmandSeyyed Saeed EshraghiAims: The present study was conducted to identify Nocardia spp. from Iran soil by various phenotypic tests. Materials and Methods: A total of 300 soil samples were collected of five different geographical regions in Iran. Nocardia isolation was performed by paraffin baiting technique. The colonies that were similar to be Nocardia spp. were stained with Gram, partially acid fast and acid-fast. Phenotypic tests were used for identification of Nocardia spp. Results: After analysis of phenotypic tests, the identified species are as follow: Nocardia asteroides (49.12%), Nocardia cyriacigeorgica (24.56%), Nocardia otitidiscaviarum (38.6%), N. asteroides complex (19.29%), Nocardia africana (3.5%), and Nocardia pseudobrasiliensis, Nocardia coubleae, Nocardia ignorata (each species; 1.75%). In this study, some of isolates (8.77%) remained undetected. Conclusion: Due to great number of Nocardia spp., high similarities among biochemical characteristics of species and the variability of some these characters, a wide range of biochemical tests should be used to identify Nocardia spp. to gain more accurate results.http://www.ijehe.org/article.asp?issn=2277-9183;year=2015;volume=4;issue=1;spage=20;epage=20;aulast=HabibniaIranNocardiaparaffin baiting techniquephenotypic tests
collection DOAJ
language English
format Article
sources DOAJ
author Shadi Habibnia
Masoumeh Rasouli Nasab
Parvin Heidarieh
Mehdi Fatahi Bafghi
Mohammad Reza Pourmand
Seyyed Saeed Eshraghi
spellingShingle Shadi Habibnia
Masoumeh Rasouli Nasab
Parvin Heidarieh
Mehdi Fatahi Bafghi
Mohammad Reza Pourmand
Seyyed Saeed Eshraghi
Phenotypic characterization of Nocardia spp. isolated from Iran soil microflora
International Journal of Environmental Health Engineering
Iran
Nocardia
paraffin baiting technique
phenotypic tests
author_facet Shadi Habibnia
Masoumeh Rasouli Nasab
Parvin Heidarieh
Mehdi Fatahi Bafghi
Mohammad Reza Pourmand
Seyyed Saeed Eshraghi
author_sort Shadi Habibnia
title Phenotypic characterization of Nocardia spp. isolated from Iran soil microflora
title_short Phenotypic characterization of Nocardia spp. isolated from Iran soil microflora
title_full Phenotypic characterization of Nocardia spp. isolated from Iran soil microflora
title_fullStr Phenotypic characterization of Nocardia spp. isolated from Iran soil microflora
title_full_unstemmed Phenotypic characterization of Nocardia spp. isolated from Iran soil microflora
title_sort phenotypic characterization of nocardia spp. isolated from iran soil microflora
publisher Wolters Kluwer Medknow Publications
series International Journal of Environmental Health Engineering
issn 2277-9183
publishDate 2015-01-01
description Aims: The present study was conducted to identify Nocardia spp. from Iran soil by various phenotypic tests. Materials and Methods: A total of 300 soil samples were collected of five different geographical regions in Iran. Nocardia isolation was performed by paraffin baiting technique. The colonies that were similar to be Nocardia spp. were stained with Gram, partially acid fast and acid-fast. Phenotypic tests were used for identification of Nocardia spp. Results: After analysis of phenotypic tests, the identified species are as follow: Nocardia asteroides (49.12%), Nocardia cyriacigeorgica (24.56%), Nocardia otitidiscaviarum (38.6%), N. asteroides complex (19.29%), Nocardia africana (3.5%), and Nocardia pseudobrasiliensis, Nocardia coubleae, Nocardia ignorata (each species; 1.75%). In this study, some of isolates (8.77%) remained undetected. Conclusion: Due to great number of Nocardia spp., high similarities among biochemical characteristics of species and the variability of some these characters, a wide range of biochemical tests should be used to identify Nocardia spp. to gain more accurate results.
topic Iran
Nocardia
paraffin baiting technique
phenotypic tests
url http://www.ijehe.org/article.asp?issn=2277-9183;year=2015;volume=4;issue=1;spage=20;epage=20;aulast=Habibnia
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AT mehdifatahibafghi phenotypiccharacterizationofnocardiasppisolatedfromiransoilmicroflora
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