Milk Microbiota: What Are We Exactly Talking About?

The development of powerful sequencing techniques has allowed, albeit with some biases, the identification and inventory of complex microbial communities that inhabit different body sites or body fluids, some of which were previously considered sterile. Notably, milk is now considered to host a comp...

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Main Authors: Georgios Oikonomou, Maria Filippa Addis, Christophe Chassard, Maria Elena Fatima Nader-Macias, I. Grant, Celine Delbès, Cristina Inés Bogni, Yves Le Loir, Sergine Even
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-02-01
Series:Frontiers in Microbiology
Subjects:
Online Access:https://www.frontiersin.org/article/10.3389/fmicb.2020.00060/full
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spelling doaj-283c7a4a98c545188a6304db66b5be192020-11-25T02:09:35ZengFrontiers Media S.A.Frontiers in Microbiology1664-302X2020-02-011110.3389/fmicb.2020.00060497338Milk Microbiota: What Are We Exactly Talking About?Georgios Oikonomou0Maria Filippa Addis1 Christophe Chassard2Maria Elena Fatima Nader-Macias3I. Grant4Celine Delbès5Cristina Inés Bogni6Yves Le Loir7Sergine Even8Institute of Veterinary Science, University of Liverpool, Neston, United KingdomDipartimento di Medicina Veterinaria, Università degli Studi di Milano, Milan, ItalyUniversité Clermont Auvergne, INRAE, UMRF, Aurillac, FranceCERELA-CONICET, San Miguel de Tucumán, ArgentinaInstitute of Veterinary Science, University of Liverpool, Neston, United KingdomUniversité Clermont Auvergne, INRAE, UMRF, Aurillac, FranceDepartamento de Microbiología e Inmunología, Facultad de Ciencias Exactas, Físico-Químicas y Naturales, Universidad Nacional de Río Cuarto, Río Cuarto, ArgentinaSTLO, UMR 1253, INRAE, Agrocampus Ouest, Rennes, FranceSTLO, UMR 1253, INRAE, Agrocampus Ouest, Rennes, FranceThe development of powerful sequencing techniques has allowed, albeit with some biases, the identification and inventory of complex microbial communities that inhabit different body sites or body fluids, some of which were previously considered sterile. Notably, milk is now considered to host a complex microbial community with great diversity. Milk microbiota is now well documented in various hosts. Based on the growing literature on this microbial community, we address here the question of what milk microbiota is. We summarize and compare the microbial composition of milk in humans and in ruminants and address the existence of a putative core milk microbiota. We discuss the factors that contribute to shape the milk microbiota or affect its composition, including host and environmental factors as well as methodological factors, such as the sampling and sequencing techniques, which likely introduce distortion in milk microbiota analysis. The roles that milk microbiota are likely to play in the mother and offspring physiology and health are presented together with recent data on the hypothesis of an enteromammary pathway. At last, this fascinating field raises a series of questions, which are listed and commented here and which open new research avenues.https://www.frontiersin.org/article/10.3389/fmicb.2020.00060/fullmilk microbiotamammary glandmetagenomicsmicrobial communityenteromammary pathwayoffspring gastrointestinal microbiota
collection DOAJ
language English
format Article
sources DOAJ
author Georgios Oikonomou
Maria Filippa Addis
Christophe Chassard
Maria Elena Fatima Nader-Macias
I. Grant
Celine Delbès
Cristina Inés Bogni
Yves Le Loir
Sergine Even
spellingShingle Georgios Oikonomou
Maria Filippa Addis
Christophe Chassard
Maria Elena Fatima Nader-Macias
I. Grant
Celine Delbès
Cristina Inés Bogni
Yves Le Loir
Sergine Even
Milk Microbiota: What Are We Exactly Talking About?
Frontiers in Microbiology
milk microbiota
mammary gland
metagenomics
microbial community
enteromammary pathway
offspring gastrointestinal microbiota
author_facet Georgios Oikonomou
Maria Filippa Addis
Christophe Chassard
Maria Elena Fatima Nader-Macias
I. Grant
Celine Delbès
Cristina Inés Bogni
Yves Le Loir
Sergine Even
author_sort Georgios Oikonomou
title Milk Microbiota: What Are We Exactly Talking About?
title_short Milk Microbiota: What Are We Exactly Talking About?
title_full Milk Microbiota: What Are We Exactly Talking About?
title_fullStr Milk Microbiota: What Are We Exactly Talking About?
title_full_unstemmed Milk Microbiota: What Are We Exactly Talking About?
title_sort milk microbiota: what are we exactly talking about?
publisher Frontiers Media S.A.
series Frontiers in Microbiology
issn 1664-302X
publishDate 2020-02-01
description The development of powerful sequencing techniques has allowed, albeit with some biases, the identification and inventory of complex microbial communities that inhabit different body sites or body fluids, some of which were previously considered sterile. Notably, milk is now considered to host a complex microbial community with great diversity. Milk microbiota is now well documented in various hosts. Based on the growing literature on this microbial community, we address here the question of what milk microbiota is. We summarize and compare the microbial composition of milk in humans and in ruminants and address the existence of a putative core milk microbiota. We discuss the factors that contribute to shape the milk microbiota or affect its composition, including host and environmental factors as well as methodological factors, such as the sampling and sequencing techniques, which likely introduce distortion in milk microbiota analysis. The roles that milk microbiota are likely to play in the mother and offspring physiology and health are presented together with recent data on the hypothesis of an enteromammary pathway. At last, this fascinating field raises a series of questions, which are listed and commented here and which open new research avenues.
topic milk microbiota
mammary gland
metagenomics
microbial community
enteromammary pathway
offspring gastrointestinal microbiota
url https://www.frontiersin.org/article/10.3389/fmicb.2020.00060/full
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