Light regimes differentially affect baseline transcript abundance of stress-axis and (neuro)development-related genes in zebrafish (Danio rerio, Hamilton 1822) AB and TL larvae

Many strains of zebrafish (Danio rerio) are readily available. Earlier we observed differences between AB and Tupfel long-fin (TL) larvae regarding baseline hypothalamus-pituitary-interrenal (HPI) axis activity and (neuro)development. Light regimes, i.e. 14 h light:10 h dark and 24 h continuous dark...

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Main Authors: Ruud van den Bos, Jan Zethof, Gert Flik, Marnix Gorissen
Format: Article
Language:English
Published: The Company of Biologists 2017-11-01
Series:Biology Open
Subjects:
Online Access:http://bio.biologists.org/content/6/11/1692
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spelling doaj-2a12a2a7ec2140d7a2db29e98733d37c2021-06-02T13:14:21ZengThe Company of BiologistsBiology Open2046-63902017-11-016111692169710.1242/bio.028969028969Light regimes differentially affect baseline transcript abundance of stress-axis and (neuro)development-related genes in zebrafish (Danio rerio, Hamilton 1822) AB and TL larvaeRuud van den Bos0Jan Zethof1Gert Flik2Marnix Gorissen3 Radboud University, Institute for Water and Wetland Research, Department of Animal Ecology and Physiology, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands Radboud University, Institute for Water and Wetland Research, Department of Animal Ecology and Physiology, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands Radboud University, Institute for Water and Wetland Research, Department of Animal Ecology and Physiology, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands Radboud University, Institute for Water and Wetland Research, Department of Animal Ecology and Physiology, Heyendaalseweg 135, 6525 AJ Nijmegen, The Netherlands Many strains of zebrafish (Danio rerio) are readily available. Earlier we observed differences between AB and Tupfel long-fin (TL) larvae regarding baseline hypothalamus-pituitary-interrenal (HPI) axis activity and (neuro)development. Light regimes, i.e. 14 h light:10 h dark and 24 h continuous dark or light, affect hatching rate and larval growth. Here, we assessed baseline transcript abundance of HPI-axis-related genes and (neuro)development-related genes of AB and TL larvae (5 days post fertilisation) using these light regimes. A principal component analysis revealed that in AB larvae the baseline expression of HPI-axis-related genes was higher the more hours of light, while the expression of (neuro)development-related genes was higher under 14 h light:10 h dark than under both continuous light or dark. In TL larvae, a complex pattern emerged regarding baseline expression of HPI-axis-related and (neuro)development-related genes. These data extend data of earlier studies by showing that light regimes affect gene-expression in larvae, and more importantly so, strengthen the notion of differences between larvae of the AB and TL strain. The latter finding adds to the growing database of phenotypical differences between zebrafish of the AB and TL strain.http://bio.biologists.org/content/6/11/1692LarvaeLight regimesGene expressionDevelopmentStress axis
collection DOAJ
language English
format Article
sources DOAJ
author Ruud van den Bos
Jan Zethof
Gert Flik
Marnix Gorissen
spellingShingle Ruud van den Bos
Jan Zethof
Gert Flik
Marnix Gorissen
Light regimes differentially affect baseline transcript abundance of stress-axis and (neuro)development-related genes in zebrafish (Danio rerio, Hamilton 1822) AB and TL larvae
Biology Open
Larvae
Light regimes
Gene expression
Development
Stress axis
author_facet Ruud van den Bos
Jan Zethof
Gert Flik
Marnix Gorissen
author_sort Ruud van den Bos
title Light regimes differentially affect baseline transcript abundance of stress-axis and (neuro)development-related genes in zebrafish (Danio rerio, Hamilton 1822) AB and TL larvae
title_short Light regimes differentially affect baseline transcript abundance of stress-axis and (neuro)development-related genes in zebrafish (Danio rerio, Hamilton 1822) AB and TL larvae
title_full Light regimes differentially affect baseline transcript abundance of stress-axis and (neuro)development-related genes in zebrafish (Danio rerio, Hamilton 1822) AB and TL larvae
title_fullStr Light regimes differentially affect baseline transcript abundance of stress-axis and (neuro)development-related genes in zebrafish (Danio rerio, Hamilton 1822) AB and TL larvae
title_full_unstemmed Light regimes differentially affect baseline transcript abundance of stress-axis and (neuro)development-related genes in zebrafish (Danio rerio, Hamilton 1822) AB and TL larvae
title_sort light regimes differentially affect baseline transcript abundance of stress-axis and (neuro)development-related genes in zebrafish (danio rerio, hamilton 1822) ab and tl larvae
publisher The Company of Biologists
series Biology Open
issn 2046-6390
publishDate 2017-11-01
description Many strains of zebrafish (Danio rerio) are readily available. Earlier we observed differences between AB and Tupfel long-fin (TL) larvae regarding baseline hypothalamus-pituitary-interrenal (HPI) axis activity and (neuro)development. Light regimes, i.e. 14 h light:10 h dark and 24 h continuous dark or light, affect hatching rate and larval growth. Here, we assessed baseline transcript abundance of HPI-axis-related genes and (neuro)development-related genes of AB and TL larvae (5 days post fertilisation) using these light regimes. A principal component analysis revealed that in AB larvae the baseline expression of HPI-axis-related genes was higher the more hours of light, while the expression of (neuro)development-related genes was higher under 14 h light:10 h dark than under both continuous light or dark. In TL larvae, a complex pattern emerged regarding baseline expression of HPI-axis-related and (neuro)development-related genes. These data extend data of earlier studies by showing that light regimes affect gene-expression in larvae, and more importantly so, strengthen the notion of differences between larvae of the AB and TL strain. The latter finding adds to the growing database of phenotypical differences between zebrafish of the AB and TL strain.
topic Larvae
Light regimes
Gene expression
Development
Stress axis
url http://bio.biologists.org/content/6/11/1692
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