Investigation on Data Fusion of Multisource Spectral Data for Rice Leaf Diseases Identification Using Machine Learning Methods

Rice diseases are major threats to rice yield and quality. Rapid and accurate detection of rice diseases is of great importance for precise disease prevention and treatment. Various spectroscopic techniques have been used to detect plant diseases. To rapidly and accurately detect three different ric...

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Main Authors: Lei Feng, Baohua Wu, Susu Zhu, Junmin Wang, Zhenzhu Su, Fei Liu, Yong He, Chu Zhang
Format: Article
Language:English
Published: Frontiers Media S.A. 2020-11-01
Series:Frontiers in Plant Science
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fpls.2020.577063/full
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spelling doaj-2a7977417dde4961b1f8a68922251d062020-11-25T04:09:10ZengFrontiers Media S.A.Frontiers in Plant Science1664-462X2020-11-011110.3389/fpls.2020.577063577063Investigation on Data Fusion of Multisource Spectral Data for Rice Leaf Diseases Identification Using Machine Learning MethodsLei Feng0Lei Feng1Baohua Wu2Baohua Wu3Susu Zhu4Susu Zhu5Junmin Wang6Zhenzhu Su7Fei Liu8Fei Liu9Yong He10Yong He11Chu Zhang12Chu Zhang13College of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, ChinaKey Laboratory of Spectroscopy Sensing, Ministry of Agriculture and Rural Affairs, Hangzhou, ChinaCollege of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, ChinaKey Laboratory of Spectroscopy Sensing, Ministry of Agriculture and Rural Affairs, Hangzhou, ChinaCollege of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, ChinaKey Laboratory of Spectroscopy Sensing, Ministry of Agriculture and Rural Affairs, Hangzhou, ChinaInstitute of Crop Science and Nuclear Technology Utilization, Zhejiang Academy of Agricultural Sciences, Hangzhou, ChinaState Key Laboratory for Rice Biology, Institute of Biotechnology, Zhejiang University, Hangzhou, ChinaCollege of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, ChinaKey Laboratory of Spectroscopy Sensing, Ministry of Agriculture and Rural Affairs, Hangzhou, ChinaCollege of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, ChinaKey Laboratory of Spectroscopy Sensing, Ministry of Agriculture and Rural Affairs, Hangzhou, ChinaCollege of Biosystems Engineering and Food Science, Zhejiang University, Hangzhou, ChinaKey Laboratory of Spectroscopy Sensing, Ministry of Agriculture and Rural Affairs, Hangzhou, ChinaRice diseases are major threats to rice yield and quality. Rapid and accurate detection of rice diseases is of great importance for precise disease prevention and treatment. Various spectroscopic techniques have been used to detect plant diseases. To rapidly and accurately detect three different rice diseases [leaf blight (Xanthomonas oryzae pv. Oryzae), rice blast (Pyricularia oryzae), and rice sheath blight (Rhizoctonia solani)], three spectroscopic techniques were applied, including visible/near-infrared hyperspectral imaging (HSI) spectra, mid-infrared spectroscopy (MIR), and laser-induced breakdown spectroscopy (LIBS). Three different levels of data fusion (raw data fusion, feature fusion, and decision fusion) fusing three different types of spectral features were adopted to categorize the diseases of rice. Principal component analysis (PCA) and autoencoder (AE) were used to extract features. Identification models based on each technique and different fusion levels were built using support vector machine (SVM), logistic regression (LR), and convolution neural network (CNN) models. Models based on HSI performed better than those based on MIR and LIBS, with the accuracy over 93% for the test set based on PCA features of HSI spectra. The performance of rice disease identification varied with different levels of fusion. The results showed that feature fusion and decision fusion could enhance identification performance. The overall results illustrated that the three techniques could be used to identify rice diseases, and data fusion strategies have great potential to be used for rice disease detection.https://www.frontiersin.org/articles/10.3389/fpls.2020.577063/fullhyperspectral imagingmid-infrared spectroscopylaser-induced breakdown spectroscopydata fusionrice disease
collection DOAJ
language English
format Article
sources DOAJ
author Lei Feng
Lei Feng
Baohua Wu
Baohua Wu
Susu Zhu
Susu Zhu
Junmin Wang
Zhenzhu Su
Fei Liu
Fei Liu
Yong He
Yong He
Chu Zhang
Chu Zhang
spellingShingle Lei Feng
Lei Feng
Baohua Wu
Baohua Wu
Susu Zhu
Susu Zhu
Junmin Wang
Zhenzhu Su
Fei Liu
Fei Liu
Yong He
Yong He
Chu Zhang
Chu Zhang
Investigation on Data Fusion of Multisource Spectral Data for Rice Leaf Diseases Identification Using Machine Learning Methods
Frontiers in Plant Science
hyperspectral imaging
mid-infrared spectroscopy
laser-induced breakdown spectroscopy
data fusion
rice disease
author_facet Lei Feng
Lei Feng
Baohua Wu
Baohua Wu
Susu Zhu
Susu Zhu
Junmin Wang
Zhenzhu Su
Fei Liu
Fei Liu
Yong He
Yong He
Chu Zhang
Chu Zhang
author_sort Lei Feng
title Investigation on Data Fusion of Multisource Spectral Data for Rice Leaf Diseases Identification Using Machine Learning Methods
title_short Investigation on Data Fusion of Multisource Spectral Data for Rice Leaf Diseases Identification Using Machine Learning Methods
title_full Investigation on Data Fusion of Multisource Spectral Data for Rice Leaf Diseases Identification Using Machine Learning Methods
title_fullStr Investigation on Data Fusion of Multisource Spectral Data for Rice Leaf Diseases Identification Using Machine Learning Methods
title_full_unstemmed Investigation on Data Fusion of Multisource Spectral Data for Rice Leaf Diseases Identification Using Machine Learning Methods
title_sort investigation on data fusion of multisource spectral data for rice leaf diseases identification using machine learning methods
publisher Frontiers Media S.A.
series Frontiers in Plant Science
issn 1664-462X
publishDate 2020-11-01
description Rice diseases are major threats to rice yield and quality. Rapid and accurate detection of rice diseases is of great importance for precise disease prevention and treatment. Various spectroscopic techniques have been used to detect plant diseases. To rapidly and accurately detect three different rice diseases [leaf blight (Xanthomonas oryzae pv. Oryzae), rice blast (Pyricularia oryzae), and rice sheath blight (Rhizoctonia solani)], three spectroscopic techniques were applied, including visible/near-infrared hyperspectral imaging (HSI) spectra, mid-infrared spectroscopy (MIR), and laser-induced breakdown spectroscopy (LIBS). Three different levels of data fusion (raw data fusion, feature fusion, and decision fusion) fusing three different types of spectral features were adopted to categorize the diseases of rice. Principal component analysis (PCA) and autoencoder (AE) were used to extract features. Identification models based on each technique and different fusion levels were built using support vector machine (SVM), logistic regression (LR), and convolution neural network (CNN) models. Models based on HSI performed better than those based on MIR and LIBS, with the accuracy over 93% for the test set based on PCA features of HSI spectra. The performance of rice disease identification varied with different levels of fusion. The results showed that feature fusion and decision fusion could enhance identification performance. The overall results illustrated that the three techniques could be used to identify rice diseases, and data fusion strategies have great potential to be used for rice disease detection.
topic hyperspectral imaging
mid-infrared spectroscopy
laser-induced breakdown spectroscopy
data fusion
rice disease
url https://www.frontiersin.org/articles/10.3389/fpls.2020.577063/full
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