Evaluation of loss of heterozygosity of chromosome 22q11.21 region in patients with congenital heart diseases

The 22q11.21 region is prone to low-copy repeats events that lead to congenital anomaly disorders. We tested genomic DNA of 20 families with non-syndromic CHD patients using a set of three known consecutive high polymorphic short tandem repeat (STR) markers along the 22q11.21 region; D22S941, D22S94...

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Main Authors: Eman G. Behiry, Azza A. Abo Senna, Amr E. Elnagar, Magda A. Eshiesh
Format: Article
Language:English
Published: SpringerOpen 2018-12-01
Series:The Egyptian Heart Journal
Online Access:http://www.sciencedirect.com/science/article/pii/S1110260818300735
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spelling doaj-2f418573b96247978b61d20a65d3ff8e2020-11-25T02:40:23ZengSpringerOpenThe Egyptian Heart Journal1110-26082018-12-01704267270Evaluation of loss of heterozygosity of chromosome 22q11.21 region in patients with congenital heart diseasesEman G. Behiry0Azza A. Abo Senna1Amr E. Elnagar2Magda A. Eshiesh3Clinical & Chemical Pathology, Faculty of Medicine, Benha University, Egypt; Corresponding author.Clinical & Chemical Pathology, Faculty of Medicine, Benha University, EgyptDepartment of Cardiology, Benha University, EgyptClinical & Chemical Pathology, Faculty of Medicine, Benha University, EgyptThe 22q11.21 region is prone to low-copy repeats events that lead to congenital anomaly disorders. We tested genomic DNA of 20 families with non-syndromic CHD patients using a set of three known consecutive high polymorphic short tandem repeat (STR) markers along the 22q11.21 region; D22S941, D22S944 and D22S264 loci. We found loss of heterozygosity (LOH) in D22S941 locus in 2 out of 20 families (10%) with 2 offspring affected by ASD combined with PS and TOF respectively. No LOH found in D22S944 and D22S264 loci either in affected cases or control group and no LOH found in D22S941 in the control group. Also we observed that D22S944 locus prone to be less allele diversity than D22S941 and D22S264 loci. Keywords: 22q11.21 Microdeletion, Congenital heart defects, STR markershttp://www.sciencedirect.com/science/article/pii/S1110260818300735
collection DOAJ
language English
format Article
sources DOAJ
author Eman G. Behiry
Azza A. Abo Senna
Amr E. Elnagar
Magda A. Eshiesh
spellingShingle Eman G. Behiry
Azza A. Abo Senna
Amr E. Elnagar
Magda A. Eshiesh
Evaluation of loss of heterozygosity of chromosome 22q11.21 region in patients with congenital heart diseases
The Egyptian Heart Journal
author_facet Eman G. Behiry
Azza A. Abo Senna
Amr E. Elnagar
Magda A. Eshiesh
author_sort Eman G. Behiry
title Evaluation of loss of heterozygosity of chromosome 22q11.21 region in patients with congenital heart diseases
title_short Evaluation of loss of heterozygosity of chromosome 22q11.21 region in patients with congenital heart diseases
title_full Evaluation of loss of heterozygosity of chromosome 22q11.21 region in patients with congenital heart diseases
title_fullStr Evaluation of loss of heterozygosity of chromosome 22q11.21 region in patients with congenital heart diseases
title_full_unstemmed Evaluation of loss of heterozygosity of chromosome 22q11.21 region in patients with congenital heart diseases
title_sort evaluation of loss of heterozygosity of chromosome 22q11.21 region in patients with congenital heart diseases
publisher SpringerOpen
series The Egyptian Heart Journal
issn 1110-2608
publishDate 2018-12-01
description The 22q11.21 region is prone to low-copy repeats events that lead to congenital anomaly disorders. We tested genomic DNA of 20 families with non-syndromic CHD patients using a set of three known consecutive high polymorphic short tandem repeat (STR) markers along the 22q11.21 region; D22S941, D22S944 and D22S264 loci. We found loss of heterozygosity (LOH) in D22S941 locus in 2 out of 20 families (10%) with 2 offspring affected by ASD combined with PS and TOF respectively. No LOH found in D22S944 and D22S264 loci either in affected cases or control group and no LOH found in D22S941 in the control group. Also we observed that D22S944 locus prone to be less allele diversity than D22S941 and D22S264 loci. Keywords: 22q11.21 Microdeletion, Congenital heart defects, STR markers
url http://www.sciencedirect.com/science/article/pii/S1110260818300735
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