Nucleic Acid-Based Lateral Flow Biosensor for <i>Salmonella</i> Typhi and <i>Salmonella</i> Paratyphi: A Detection in Stool Samples of Suspected Carriers

A multiplex rapid detection system, based on a PCR-lateral flow biosensor (mPCR-LFB) was developed to identify <i>Salmonella</i> Typhi and <i>Salmonella</i> Paratyphi A from suspected carriers. The lower detection limit for <i>S</i>. Typhi and <i>S</i>...

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Main Authors: Zulkiply Nor Amalina, Muhammad Fazli Khalid, Sjafri Faizul Rahman, Muhamad Nuramin Ahmad, Mohamad Ahmad Najib, Asma Ismail, Ismail Aziah
Format: Article
Language:English
Published: MDPI AG 2021-04-01
Series:Diagnostics
Subjects:
Online Access:https://www.mdpi.com/2075-4418/11/4/700
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spelling doaj-2ffe0a32fac44ad8b214fabfffa91a882021-04-14T23:02:46ZengMDPI AGDiagnostics2075-44182021-04-011170070010.3390/diagnostics11040700Nucleic Acid-Based Lateral Flow Biosensor for <i>Salmonella</i> Typhi and <i>Salmonella</i> Paratyphi: A Detection in Stool Samples of Suspected CarriersZulkiply Nor Amalina0Muhammad Fazli Khalid1Sjafri Faizul Rahman2Muhamad Nuramin Ahmad3Mohamad Ahmad Najib4Asma Ismail5Ismail Aziah6Institute for Research in Molecular Medicine (INFORMM), Universiti Sains Malaysia, Kubang Kerian 16150, Kelantan, MalaysiaInstitute for Research in Molecular Medicine (INFORMM), Universiti Sains Malaysia, Kubang Kerian 16150, Kelantan, MalaysiaInstitute for Research in Molecular Medicine (INFORMM), Universiti Sains Malaysia, Kubang Kerian 16150, Kelantan, MalaysiaInstitute for Research in Molecular Medicine (INFORMM), Universiti Sains Malaysia, Kubang Kerian 16150, Kelantan, MalaysiaInstitute for Research in Molecular Medicine (INFORMM), Universiti Sains Malaysia, Kubang Kerian 16150, Kelantan, MalaysiaInstitute for Research in Molecular Medicine (INFORMM), Universiti Sains Malaysia, Kubang Kerian 16150, Kelantan, MalaysiaInstitute for Research in Molecular Medicine (INFORMM), Universiti Sains Malaysia, Kubang Kerian 16150, Kelantan, MalaysiaA multiplex rapid detection system, based on a PCR-lateral flow biosensor (mPCR-LFB) was developed to identify <i>Salmonella</i> Typhi and <i>Salmonella</i> Paratyphi A from suspected carriers. The lower detection limit for <i>S</i>. Typhi and <i>S</i>. Paratyphi A was 0.16 and 0.08 ng DNA equivalent to 10 and 10<sup>2</sup> CFU/mL, respectively. Lateral flow biosensor was used for visual detection of mPCR amplicons (stgA, SPAint, ompC, internal amplification control) by labeling forward primers with fluorescein-isothiocyanate (FITC), Texas Red, dinitrophenol (DNP) and digoxigenin (DIG) and reverse primers with biotin. Binding of streptavidin-colloidal gold conjugate with the amplicons resulted in formation of a red color dots on the strip after 15–20 min of sample exposure. The nucleic acid lateral flow analysis of the mPCR-LFB was better in sensitivity and more rapid than the conventional agarose gel electrophoresis. Moreover, the mPCR-LFB showed 100% sensitivity and specificity when evaluated with stools spiked with 100 isolates of <i>Salmonella</i> genus and other bacteria. A prospective cohort study on stool samples of 1176 food handlers in outbreak areas (suspected carriers) resulted in 23 (2%) positive for <i>S</i>. Typhi. The developed assay has potential to be used for rapid detection of typhoid carriers in surveillance program.https://www.mdpi.com/2075-4418/11/4/700multiplex PCR-lateral flow biosensorpoint-of-care testing<i>Salmonella</i> Typhi<i>Salmonella</i> Paratyphi Afood handlerstyphoid carriers
collection DOAJ
language English
format Article
sources DOAJ
author Zulkiply Nor Amalina
Muhammad Fazli Khalid
Sjafri Faizul Rahman
Muhamad Nuramin Ahmad
Mohamad Ahmad Najib
Asma Ismail
Ismail Aziah
spellingShingle Zulkiply Nor Amalina
Muhammad Fazli Khalid
Sjafri Faizul Rahman
Muhamad Nuramin Ahmad
Mohamad Ahmad Najib
Asma Ismail
Ismail Aziah
Nucleic Acid-Based Lateral Flow Biosensor for <i>Salmonella</i> Typhi and <i>Salmonella</i> Paratyphi: A Detection in Stool Samples of Suspected Carriers
Diagnostics
multiplex PCR-lateral flow biosensor
point-of-care testing
<i>Salmonella</i> Typhi
<i>Salmonella</i> Paratyphi A
food handlers
typhoid carriers
author_facet Zulkiply Nor Amalina
Muhammad Fazli Khalid
Sjafri Faizul Rahman
Muhamad Nuramin Ahmad
Mohamad Ahmad Najib
Asma Ismail
Ismail Aziah
author_sort Zulkiply Nor Amalina
title Nucleic Acid-Based Lateral Flow Biosensor for <i>Salmonella</i> Typhi and <i>Salmonella</i> Paratyphi: A Detection in Stool Samples of Suspected Carriers
title_short Nucleic Acid-Based Lateral Flow Biosensor for <i>Salmonella</i> Typhi and <i>Salmonella</i> Paratyphi: A Detection in Stool Samples of Suspected Carriers
title_full Nucleic Acid-Based Lateral Flow Biosensor for <i>Salmonella</i> Typhi and <i>Salmonella</i> Paratyphi: A Detection in Stool Samples of Suspected Carriers
title_fullStr Nucleic Acid-Based Lateral Flow Biosensor for <i>Salmonella</i> Typhi and <i>Salmonella</i> Paratyphi: A Detection in Stool Samples of Suspected Carriers
title_full_unstemmed Nucleic Acid-Based Lateral Flow Biosensor for <i>Salmonella</i> Typhi and <i>Salmonella</i> Paratyphi: A Detection in Stool Samples of Suspected Carriers
title_sort nucleic acid-based lateral flow biosensor for <i>salmonella</i> typhi and <i>salmonella</i> paratyphi: a detection in stool samples of suspected carriers
publisher MDPI AG
series Diagnostics
issn 2075-4418
publishDate 2021-04-01
description A multiplex rapid detection system, based on a PCR-lateral flow biosensor (mPCR-LFB) was developed to identify <i>Salmonella</i> Typhi and <i>Salmonella</i> Paratyphi A from suspected carriers. The lower detection limit for <i>S</i>. Typhi and <i>S</i>. Paratyphi A was 0.16 and 0.08 ng DNA equivalent to 10 and 10<sup>2</sup> CFU/mL, respectively. Lateral flow biosensor was used for visual detection of mPCR amplicons (stgA, SPAint, ompC, internal amplification control) by labeling forward primers with fluorescein-isothiocyanate (FITC), Texas Red, dinitrophenol (DNP) and digoxigenin (DIG) and reverse primers with biotin. Binding of streptavidin-colloidal gold conjugate with the amplicons resulted in formation of a red color dots on the strip after 15–20 min of sample exposure. The nucleic acid lateral flow analysis of the mPCR-LFB was better in sensitivity and more rapid than the conventional agarose gel electrophoresis. Moreover, the mPCR-LFB showed 100% sensitivity and specificity when evaluated with stools spiked with 100 isolates of <i>Salmonella</i> genus and other bacteria. A prospective cohort study on stool samples of 1176 food handlers in outbreak areas (suspected carriers) resulted in 23 (2%) positive for <i>S</i>. Typhi. The developed assay has potential to be used for rapid detection of typhoid carriers in surveillance program.
topic multiplex PCR-lateral flow biosensor
point-of-care testing
<i>Salmonella</i> Typhi
<i>Salmonella</i> Paratyphi A
food handlers
typhoid carriers
url https://www.mdpi.com/2075-4418/11/4/700
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