One‐carbon metabolism, folate, zinc and translation

Summary The translation process, central to life, is tightly connected to the one‐carbon (1‐C) metabolism via a plethora of macromolecule modifications and specific effectors. Using manual genome annotations and putting together a variety of experimental studies, we explore here the possible reasons...

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Main Authors: Antoine Danchin, Agnieszka Sekowska, Conghui You
Format: Article
Language:English
Published: Wiley 2020-07-01
Series:Microbial Biotechnology
Online Access:https://doi.org/10.1111/1751-7915.13550
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spelling doaj-302cb1f0413f4b9586f88f6013bc26da2021-07-23T03:15:35ZengWileyMicrobial Biotechnology1751-79152020-07-0113489992510.1111/1751-7915.13550One‐carbon metabolism, folate, zinc and translationAntoine Danchin0Agnieszka Sekowska1Conghui You2AMAbiotics SAS Institut Cochin 24 rue du Faubourg Saint‐Jacques 75014 Paris FranceAMAbiotics SAS Institut Cochin 24 rue du Faubourg Saint‐Jacques 75014 Paris FranceShenzhen Key Laboratory of Microbial Genetic Engineering College of Life Sciences and Oceanology Shenzhen University 1066 Xueyuan Rd 518055 Shenzhen ChinaSummary The translation process, central to life, is tightly connected to the one‐carbon (1‐C) metabolism via a plethora of macromolecule modifications and specific effectors. Using manual genome annotations and putting together a variety of experimental studies, we explore here the possible reasons of this critical interaction, likely to have originated during the earliest steps of the birth of the first cells. Methionine, S‐adenosylmethionine and tetrahydrofolate dominate this interaction. Yet, 1‐C metabolism is unlikely to be a simple frozen accident of primaeval conditions. Reactive 1‐C species (ROCS) are buffered by the translation machinery in a way tightly associated with the metabolism of iron–sulfur clusters, zinc and potassium availability, possibly coupling carbon metabolism to nitrogen metabolism. In this process, the highly modified position 34 of tRNA molecules plays a critical role. Overall, this metabolic integration may serve both as a protection against the deleterious formation of excess carbon under various growth transitions or environmental unbalanced conditions and as a regulator of zinc homeostasis, while regulating input of prosthetic groups into nascent proteins. This knowledge should be taken into account in metabolic engineering.https://doi.org/10.1111/1751-7915.13550
collection DOAJ
language English
format Article
sources DOAJ
author Antoine Danchin
Agnieszka Sekowska
Conghui You
spellingShingle Antoine Danchin
Agnieszka Sekowska
Conghui You
One‐carbon metabolism, folate, zinc and translation
Microbial Biotechnology
author_facet Antoine Danchin
Agnieszka Sekowska
Conghui You
author_sort Antoine Danchin
title One‐carbon metabolism, folate, zinc and translation
title_short One‐carbon metabolism, folate, zinc and translation
title_full One‐carbon metabolism, folate, zinc and translation
title_fullStr One‐carbon metabolism, folate, zinc and translation
title_full_unstemmed One‐carbon metabolism, folate, zinc and translation
title_sort one‐carbon metabolism, folate, zinc and translation
publisher Wiley
series Microbial Biotechnology
issn 1751-7915
publishDate 2020-07-01
description Summary The translation process, central to life, is tightly connected to the one‐carbon (1‐C) metabolism via a plethora of macromolecule modifications and specific effectors. Using manual genome annotations and putting together a variety of experimental studies, we explore here the possible reasons of this critical interaction, likely to have originated during the earliest steps of the birth of the first cells. Methionine, S‐adenosylmethionine and tetrahydrofolate dominate this interaction. Yet, 1‐C metabolism is unlikely to be a simple frozen accident of primaeval conditions. Reactive 1‐C species (ROCS) are buffered by the translation machinery in a way tightly associated with the metabolism of iron–sulfur clusters, zinc and potassium availability, possibly coupling carbon metabolism to nitrogen metabolism. In this process, the highly modified position 34 of tRNA molecules plays a critical role. Overall, this metabolic integration may serve both as a protection against the deleterious formation of excess carbon under various growth transitions or environmental unbalanced conditions and as a regulator of zinc homeostasis, while regulating input of prosthetic groups into nascent proteins. This knowledge should be taken into account in metabolic engineering.
url https://doi.org/10.1111/1751-7915.13550
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AT agnieszkasekowska onecarbonmetabolismfolatezincandtranslation
AT conghuiyou onecarbonmetabolismfolatezincandtranslation
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