Long intergenic non-coding RNAs (LincRNAs) identified by RNA-seq in breast cancer.

Long intergenic non-coding RNAs (LincRNAs) identified by RNA-seq in breast cancer.

In an attempt to find the correlation of aberrant expression of long intergenic noncoding RNAs (lincRNAs) with cancer, twenty-five samples of breast cancer tissue and respective adjacent normal tissue were studied for the expression of lincRNAs by RNA-seq. Among the 538 lincRNAs studied, 124 lincRNA...

Full description

Bibliographic Details
Main Authors:	Xianfeng Ding, Limin Zhu, Ting Ji, Xiping Zhang, Fengmei Wang, Shaoju Gan, Ming Zhao, Hongjian Yang
Format:	Article
Language:	English
Published:	Public Library of Science (PLoS) 2014-01-01
Series:	PLoS ONE
Online Access:	http://europepmc.org/articles/PMC4118859?pdf=render

Similar Items

Identification of long intergenic non-coding RNAs (lincRNAs) deregulated in gastrointestinal stromal tumors (GISTs).
by: Ugne Gyvyte, et al.
Published: (2018-01-01)

lincRNAs: Genomics, Evolution, and Mechanisms
by: Ulitsky, Igor, et al.
Published: (2015)

Sebnif: an integrated bioinformatics pipeline for the identification of novel large intergenic noncoding RNAs (lincRNAs)--application in human skeletal muscle cells.
by: Kun Sun, et al.
Published: (2014-01-01)

Chromatin Landscape Distinguishes the Genomic Loci of Hundreds of Androgen-Receptor-Associated LincRNAs From the Loci of Non-associated LincRNAs
by: Lucas F. daSilva, et al.
Published: (2018-04-01)

MiRNAs and LincRNAs: Could They Be Considered as Biomarkers in Colorectal Cancer?
by: Jesús Garcia-Foncillas, et al.
Published: (2012-01-01)

lincRNAs act in the circuitry controlling pluripotency and differentiation
by: Guttman, Mitchell, et al.
Published: (2012)

DiseaseLinc: Disease Enrichment Analysis of Sets of Differentially Expressed LincRNAs
by: Piyush More, et al.
Published: (2021-03-01)

A Novel Approach to Identify Enhancer lincRNAs by Integrating Genome, Epigenome, and Regulatome
by: Hui Liu, et al.
Published: (2019-12-01)

Comparative genomic analyses highlight the contribution of pseudogenized protein-coding genes to human lincRNAs
by: Wan-Hsin Liu, et al.
Published: (2017-10-01)

Sperm Originated Chromatin Imprints and LincRNAs in Organismal Development and Cancer
by: Santhilal Subhash, et al.
Published: (2020-06-01)

Systematic evaluation of C. elegans lincRNAs with CRISPR knockout mutants
by: Shuai Wei, et al.
Published: (2019-01-01)

Functional Urate-Associated Genetic Variants Influence Expression of lincRNAs LINC01229 and MAFTRR
by: Megan Leask, et al.
Published: (2019-01-01)

Comprehensive Analysis of LincRNAs in Classical and Basal-Like Subtypes of Pancreatic Cancer
by: Markus Glaß, et al.
Published: (2020-07-01)

Corrigendum: Functional Urate-Associated Genetic Variants Influence Expression of lincRNAs LINC01229 and MAFTRR
by: Megan Leask, et al.
Published: (2019-04-01)

Identify REST-targeting LincRNAs that are Essential for IL-6 induced Neuroendocrine Differentiation of Prostate Cancer cells
by: Yun-Li Luo, et al.
Published: (2017)

Multiple knockout mouse models reveal lincRNAs are required for life and brain development
by: Martin Sauvageau, et al.
Published: (2013-12-01)

The Contribution of lincRNAs at the Interface between Cell Cycle Regulation and Cell State Maintenance
by: Adriano Biasini, et al.
Published: (2020-07-01)

Diverse Phenotypes and Specific Transcription Patterns in Twenty Mouse Lines with Ablated LincRNAs.
by: Ka-Man Venus Lai, et al.
Published: (2015-01-01)

Multiple knockout mouse models reveal lincRNAs are required for life and brain development
by: Goff, Loyal, et al.
Published: (2014)

Conserved Function of lincRNAs in Vertebrate Embryonic Development despite Rapid Sequence Evolution
by: Ulitsky, Igor, et al.
Published: (2014)

Profiling of lincRNAs in human pluripotent stem cell derived forebrain neural progenitor cells
by: Daniela A. Grassi, et al.
Published: (2020-01-01)

Comprehensive Profiling of lincRNAs in Lung Adenocarcinoma of Never Smokers Reveals Their Roles in Cancer Development and Prognosis
by: Ying Li, et al.
Published: (2017-11-01)

Placenta-Enriched LincRNAs MIR503HG and LINC00629 Decrease Migration and Invasion Potential of JEG-3 Cell Line.
by: Bruna Rodrigues Muys, et al.
Published: (2016-01-01)

Genome-wide discovery of lincRNAs with spatiotemporal expression patterns in the skin of goat during the cashmere growth cycle
by: Shen Song, et al.
Published: (2018-06-01)

Ab initio reconstruction of transcriptomes of pluripotent and lineage committed cells reveals gene structures of thousands of lincRNAs
by: Guttman, Mitchell, et al.
Published: (2012)

RNA-Seq Implies Divergent Regulation Patterns of LincRNA on Spermatogenesis and Testis Growth in Goats
by: Dongdong Bo, et al.
Published: (2021-02-01)

Sex-biased mouse liver lincRNAs: validation and impact of mouse knockout models that perturb hepatic growth signaling
by: Yilmaz, Feyza
Published: (2016)

Profiling of long non-coding RNAs identifies LINC00958 and LINC01296 as candidate oncogenes in bladder cancer
by: Anna Katharina Seitz, et al.
Published: (2017-03-01)

Comparative analysis of lincRNA in insect species
by: Alberto Lopez-Ezquerra, et al.
Published: (2017-07-01)

Identify Neuroendocrine Prostate Cancer (NEPC)-related lincRNA in Relapsed Prostate Cancer
by: Ting-Yu Cheng, et al.
Published: (2019)

Advances in Mechanism of LincRNA-p21 in Cancer
by: ZHAO Suyue, et al.
Published: (2020-10-01)

LincRNA-p21: Implications in Human Diseases
by: Sai-Sai Tang, et al.
Published: (2015-08-01)

Novel lincRNA Discovery and Tissue-Specific Gene Expression across 30 Normal Human Tissues
by: Xianfeng Chen, et al.
Published: (2021-04-01)

Significance of Single-Nucleotide Variants in Long Intergenic Non-protein Coding RNAs
by: Hecun Zou, et al.
Published: (2020-05-01)

Systematic identification of long intergenic non-coding RNAs expressed in bovine oocytes
by: Jian Wang, et al.
Published: (2020-02-01)

Integrative Analysis of Normal Long Intergenic Non-Coding RNAs in Prostate Cancer.
by: Pushpinder Bawa, et al.
Published: (2015-01-01)

Single cell expression analysis of primate-specific retroviruses-derived HPAT lincRNAs in viable human blastocysts identifies embryonic cells co-expressing genetic markers of multiple lineages
by: Gennadi Glinsky, et al.
Published: (2018-06-01)

Genome-wide identification and characterization of long intergenic non-coding RNAs in Ganoderma lucidum.
by: Jianqin Li, et al.
Published: (2014-01-01)

Evolinc: A Tool for the Identification and Evolutionary Comparison of Long Intergenic Non-coding RNAs
by: Andrew D. L. Nelson, et al.
Published: (2017-05-01)

Evolinc: A Tool for the Identification and Evolutionary Comparison of Long Intergenic Non-coding RNAs
by: Nelson, Andrew D. L., et al.
Published: (2017)