Association Analysis of Polymorphisms with Aspirin-Exacerbated Respiratory Disease in a Korean Population

The tyrosine-protein kinase Tec (TEC) is a member of non-receptor tyrosine kinases and has critical roles in cell signaling transmission, calcium mobilization, gene expression, and transformation. TEC is also involved in various immune responses, such as mast cell activation. Therefore, we hypothesi...

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Main Authors: Jin Sol Lee, Joon Seol Bae, Byung-Lae Park, Hyun Sub Cheong, Jeong-Hyun Kim, Jason Yongha Kim, Suhg Namgoong, Ji-On Kim, Choon-Sik Park, Hyoung Doo Shin
Format: Article
Language:English
Published: Korea Genome Organization 2014-06-01
Series:Genomics & Informatics
Subjects:
Online Access:http://genominfo.org/upload/pdf/gni-12-58.pdf
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spelling doaj-3582a685c3ff416d8c5c1144e3b7a86a2020-11-24T21:12:09ZengKorea Genome OrganizationGenomics & Informatics1598-866X2234-07422014-06-01122586310.5808/GI.2014.12.2.58130Association Analysis of Polymorphisms with Aspirin-Exacerbated Respiratory Disease in a Korean PopulationJin Sol Lee0Joon Seol Bae1Byung-Lae Park2Hyun Sub Cheong3Jeong-Hyun Kim4Jason Yongha Kim5Suhg Namgoong6Ji-On Kim7Choon-Sik Park8Hyoung Doo Shin9Research Institute for Basic Science, Sogang University, Seoul 121-742, Korea.Laboratory of Translational Genomics, Samsung Genome Institute, Samsung Medical Center, Seoul 135-710, Korea.Department of Genetic Epidemiology, SNP Genetics, Inc., Seoul 153-801, Korea.Department of Genetic Epidemiology, SNP Genetics, Inc., Seoul 153-801, Korea.Research Institute for Basic Science, Sogang University, Seoul 121-742, Korea.Department of Life Science, Sogang University, Seoul 121-742, Korea.Department of Life Science, Sogang University, Seoul 121-742, Korea.Department of Life Science, Sogang University, Seoul 121-742, Korea.Division of Allergy and Respiratory Medicine, Soonchunhyang University Seoul Hospital, Seoul 140-743, Korea.Department of Life Science, Sogang University, Seoul 121-742, Korea.The tyrosine-protein kinase Tec (TEC) is a member of non-receptor tyrosine kinases and has critical roles in cell signaling transmission, calcium mobilization, gene expression, and transformation. TEC is also involved in various immune responses, such as mast cell activation. Therefore, we hypothesized that TEC polymorphisms might be involved in aspirin-exacerbated respiratory disease (AERD) pathogenesis. We genotyped 38 TEC single nucleotide polymorphisms in a total of 592 subjects, which comprised 163 AERD cases and 429 aspirin-tolerant asthma controls. Logistic regression analysis was performed to examine the associations between TEC polymorphisms and the risk of AERD in a Korean population. The results revealed that TEC polymorphisms and major haplotypes were not associated with the risk of AERD. In another regression analysis for the fall rate of forced expiratory volume in 1 second (FEV1) by aspirin provocation, two variations (rs7664091 and rs12500534) and one haplotype (TEC_BL2_ht4) showed nominal associations with FEV1 decline (p = 0.03-0.04). However, the association signals were not retained after performing corrections for multiple testing. Despite TEC playing an important role in immune responses, the results from the present study suggest that TEC polymorphisms do not affect AERD susceptibility. Findings from the present study might contribute to the genetic etiology of AERD pathogenesis.http://genominfo.org/upload/pdf/gni-12-58.pdfaspirin-exacerbated respiratory diseaseaspirin-tolerant asthmaTec protein tyrosine kinasegenetic polymorphismshaplotypes
collection DOAJ
language English
format Article
sources DOAJ
author Jin Sol Lee
Joon Seol Bae
Byung-Lae Park
Hyun Sub Cheong
Jeong-Hyun Kim
Jason Yongha Kim
Suhg Namgoong
Ji-On Kim
Choon-Sik Park
Hyoung Doo Shin
spellingShingle Jin Sol Lee
Joon Seol Bae
Byung-Lae Park
Hyun Sub Cheong
Jeong-Hyun Kim
Jason Yongha Kim
Suhg Namgoong
Ji-On Kim
Choon-Sik Park
Hyoung Doo Shin
Association Analysis of Polymorphisms with Aspirin-Exacerbated Respiratory Disease in a Korean Population
Genomics & Informatics
aspirin-exacerbated respiratory disease
aspirin-tolerant asthma
Tec protein tyrosine kinase
genetic polymorphisms
haplotypes
author_facet Jin Sol Lee
Joon Seol Bae
Byung-Lae Park
Hyun Sub Cheong
Jeong-Hyun Kim
Jason Yongha Kim
Suhg Namgoong
Ji-On Kim
Choon-Sik Park
Hyoung Doo Shin
author_sort Jin Sol Lee
title Association Analysis of Polymorphisms with Aspirin-Exacerbated Respiratory Disease in a Korean Population
title_short Association Analysis of Polymorphisms with Aspirin-Exacerbated Respiratory Disease in a Korean Population
title_full Association Analysis of Polymorphisms with Aspirin-Exacerbated Respiratory Disease in a Korean Population
title_fullStr Association Analysis of Polymorphisms with Aspirin-Exacerbated Respiratory Disease in a Korean Population
title_full_unstemmed Association Analysis of Polymorphisms with Aspirin-Exacerbated Respiratory Disease in a Korean Population
title_sort association analysis of polymorphisms with aspirin-exacerbated respiratory disease in a korean population
publisher Korea Genome Organization
series Genomics & Informatics
issn 1598-866X
2234-0742
publishDate 2014-06-01
description The tyrosine-protein kinase Tec (TEC) is a member of non-receptor tyrosine kinases and has critical roles in cell signaling transmission, calcium mobilization, gene expression, and transformation. TEC is also involved in various immune responses, such as mast cell activation. Therefore, we hypothesized that TEC polymorphisms might be involved in aspirin-exacerbated respiratory disease (AERD) pathogenesis. We genotyped 38 TEC single nucleotide polymorphisms in a total of 592 subjects, which comprised 163 AERD cases and 429 aspirin-tolerant asthma controls. Logistic regression analysis was performed to examine the associations between TEC polymorphisms and the risk of AERD in a Korean population. The results revealed that TEC polymorphisms and major haplotypes were not associated with the risk of AERD. In another regression analysis for the fall rate of forced expiratory volume in 1 second (FEV1) by aspirin provocation, two variations (rs7664091 and rs12500534) and one haplotype (TEC_BL2_ht4) showed nominal associations with FEV1 decline (p = 0.03-0.04). However, the association signals were not retained after performing corrections for multiple testing. Despite TEC playing an important role in immune responses, the results from the present study suggest that TEC polymorphisms do not affect AERD susceptibility. Findings from the present study might contribute to the genetic etiology of AERD pathogenesis.
topic aspirin-exacerbated respiratory disease
aspirin-tolerant asthma
Tec protein tyrosine kinase
genetic polymorphisms
haplotypes
url http://genominfo.org/upload/pdf/gni-12-58.pdf
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