One-shot phase-recovery using a cellphone RGB camera on a Jamin-Lebedeff microscope.

Jamin-Lebedeff (JL) polarization interference microscopy is a classical method for determining the change in the optical path of transparent tissues. Whilst a differential interference contrast (DIC) microscopy interferes an image with itself shifted by half a point spread function, the shear betwee...

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Main Authors: Benedict Diederich, Barbora Marsikova, Brad Amos, Rainer Heintzmann
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2019-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0227096
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spelling doaj-35fc2832a24d439eadf3ae7124affeb92021-03-04T12:43:12ZengPublic Library of Science (PLoS)PLoS ONE1932-62032019-01-011412e022709610.1371/journal.pone.0227096One-shot phase-recovery using a cellphone RGB camera on a Jamin-Lebedeff microscope.Benedict DiederichBarbora MarsikovaBrad AmosRainer HeintzmannJamin-Lebedeff (JL) polarization interference microscopy is a classical method for determining the change in the optical path of transparent tissues. Whilst a differential interference contrast (DIC) microscopy interferes an image with itself shifted by half a point spread function, the shear between the object and reference image in a JL-microscope is about half the field of view. The optical path difference (OPD) between the sample and reference region (assumed to be empty) is encoded into a color by white-light interference. From a color-table, the Michel-Levy chart, the OPD can be deduced. In cytology JL-imaging can be used as a way to determine the OPD which closely corresponds to the dry mass per area of cells in a single image. Like in other interference microscopy methods (e.g. holography), we present a phase retrieval method relying on single-shot measurements only, thus allowing real-time quantitative phase measurements. This is achieved by adding several customized 3D-printed parts (e.g. rotational polarization-filter holders) and a modern cellphone with an RGB-camera to the Jamin-Lebedeff setup, thus bringing an old microscope back to life. The algorithm is calibrated using a reference image of a known phase object (e.g. optical fiber). A gradient-descent based inverse problem generates an inverse look-up-table (LUT) which is used to convert the measured RGB signal of a phase-sample into an OPD. To account for possible ambiguities in the phase-map or phase-unwrapping artifacts we introduce a total-variation based regularization. We present results from fixed and living biological samples as well as reference samples for comparison.https://doi.org/10.1371/journal.pone.0227096
collection DOAJ
language English
format Article
sources DOAJ
author Benedict Diederich
Barbora Marsikova
Brad Amos
Rainer Heintzmann
spellingShingle Benedict Diederich
Barbora Marsikova
Brad Amos
Rainer Heintzmann
One-shot phase-recovery using a cellphone RGB camera on a Jamin-Lebedeff microscope.
PLoS ONE
author_facet Benedict Diederich
Barbora Marsikova
Brad Amos
Rainer Heintzmann
author_sort Benedict Diederich
title One-shot phase-recovery using a cellphone RGB camera on a Jamin-Lebedeff microscope.
title_short One-shot phase-recovery using a cellphone RGB camera on a Jamin-Lebedeff microscope.
title_full One-shot phase-recovery using a cellphone RGB camera on a Jamin-Lebedeff microscope.
title_fullStr One-shot phase-recovery using a cellphone RGB camera on a Jamin-Lebedeff microscope.
title_full_unstemmed One-shot phase-recovery using a cellphone RGB camera on a Jamin-Lebedeff microscope.
title_sort one-shot phase-recovery using a cellphone rgb camera on a jamin-lebedeff microscope.
publisher Public Library of Science (PLoS)
series PLoS ONE
issn 1932-6203
publishDate 2019-01-01
description Jamin-Lebedeff (JL) polarization interference microscopy is a classical method for determining the change in the optical path of transparent tissues. Whilst a differential interference contrast (DIC) microscopy interferes an image with itself shifted by half a point spread function, the shear between the object and reference image in a JL-microscope is about half the field of view. The optical path difference (OPD) between the sample and reference region (assumed to be empty) is encoded into a color by white-light interference. From a color-table, the Michel-Levy chart, the OPD can be deduced. In cytology JL-imaging can be used as a way to determine the OPD which closely corresponds to the dry mass per area of cells in a single image. Like in other interference microscopy methods (e.g. holography), we present a phase retrieval method relying on single-shot measurements only, thus allowing real-time quantitative phase measurements. This is achieved by adding several customized 3D-printed parts (e.g. rotational polarization-filter holders) and a modern cellphone with an RGB-camera to the Jamin-Lebedeff setup, thus bringing an old microscope back to life. The algorithm is calibrated using a reference image of a known phase object (e.g. optical fiber). A gradient-descent based inverse problem generates an inverse look-up-table (LUT) which is used to convert the measured RGB signal of a phase-sample into an OPD. To account for possible ambiguities in the phase-map or phase-unwrapping artifacts we introduce a total-variation based regularization. We present results from fixed and living biological samples as well as reference samples for comparison.
url https://doi.org/10.1371/journal.pone.0227096
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