The Impact of Age and Sex in DLBCL: Systems Biology Analyses Identify Distinct Molecular Changes and Signaling Networks

Potential molecular alterations based on age and sex are not well defined in diffuse large B-cell lymphoma (DLBCL). We examined global transcriptome DLBCL data from The Cancer Genome Atlas (TCGA) via a systems biology approach to determine the molecular differences associated with age and sex. Colle...

Full description

Bibliographic Details
Main Authors: Afshin Beheshti, Donna Neuberg, J. Tyson Mcdonald, Charles R. Vanderburg, Andrew M. Evens
Format: Article
Language:English
Published: SAGE Publishing 2015-01-01
Series:Cancer Informatics
Online Access:https://doi.org/10.4137/CIN.S34144
id doaj-365c3e651c95481188c033b114205c22
record_format Article
spelling doaj-365c3e651c95481188c033b114205c222020-11-25T03:24:36ZengSAGE PublishingCancer Informatics1176-93512015-01-011410.4137/CIN.S34144The Impact of Age and Sex in DLBCL: Systems Biology Analyses Identify Distinct Molecular Changes and Signaling NetworksAfshin Beheshti0Donna Neuberg1J. Tyson Mcdonald2Charles R. Vanderburg3Andrew M. Evens4Division of Hematology/Oncology, Molecular Oncology Research Institute, Tufts Medical Center, Boston, MA, USA.Department of Biostatistics and Computational Biology, Dana-Farber Cancer Institute, Harvard University, Boston, MA, USA.Cancer Research Center, Hampton University, Hampton, VA, USA.Harvard NeuroDiscovery Center, Massachusetts General Hospital, Boston, MA, USA.Tufts University School of Medicine, Boston, MA, USA.Potential molecular alterations based on age and sex are not well defined in diffuse large B-cell lymphoma (DLBCL). We examined global transcriptome DLBCL data from The Cancer Genome Atlas (TCGA) via a systems biology approach to determine the molecular differences associated with age and sex. Collectively, sex and age revealed striking transcriptional differences with older age associated with decreased metabolism and telomere functions and female sex was associated with decreased interferon signaling, transcription, cell cycle, and PD-1 signaling. We discovered that the key genes for most groups strongly regulated immune function activity. Furthermore, older females were predicted to have less DLBCL progression versus older males and young females. Finally, analyses in systems biology revealed that JUN and CYCS signaling were the most critical factors associated with tumor progression in older and male patients. We identified important molecular perturbations in DLBCL that were strongly associated with age and sex and were predicted to strongly influence tumor progression.https://doi.org/10.4137/CIN.S34144
collection DOAJ
language English
format Article
sources DOAJ
author Afshin Beheshti
Donna Neuberg
J. Tyson Mcdonald
Charles R. Vanderburg
Andrew M. Evens
spellingShingle Afshin Beheshti
Donna Neuberg
J. Tyson Mcdonald
Charles R. Vanderburg
Andrew M. Evens
The Impact of Age and Sex in DLBCL: Systems Biology Analyses Identify Distinct Molecular Changes and Signaling Networks
Cancer Informatics
author_facet Afshin Beheshti
Donna Neuberg
J. Tyson Mcdonald
Charles R. Vanderburg
Andrew M. Evens
author_sort Afshin Beheshti
title The Impact of Age and Sex in DLBCL: Systems Biology Analyses Identify Distinct Molecular Changes and Signaling Networks
title_short The Impact of Age and Sex in DLBCL: Systems Biology Analyses Identify Distinct Molecular Changes and Signaling Networks
title_full The Impact of Age and Sex in DLBCL: Systems Biology Analyses Identify Distinct Molecular Changes and Signaling Networks
title_fullStr The Impact of Age and Sex in DLBCL: Systems Biology Analyses Identify Distinct Molecular Changes and Signaling Networks
title_full_unstemmed The Impact of Age and Sex in DLBCL: Systems Biology Analyses Identify Distinct Molecular Changes and Signaling Networks
title_sort impact of age and sex in dlbcl: systems biology analyses identify distinct molecular changes and signaling networks
publisher SAGE Publishing
series Cancer Informatics
issn 1176-9351
publishDate 2015-01-01
description Potential molecular alterations based on age and sex are not well defined in diffuse large B-cell lymphoma (DLBCL). We examined global transcriptome DLBCL data from The Cancer Genome Atlas (TCGA) via a systems biology approach to determine the molecular differences associated with age and sex. Collectively, sex and age revealed striking transcriptional differences with older age associated with decreased metabolism and telomere functions and female sex was associated with decreased interferon signaling, transcription, cell cycle, and PD-1 signaling. We discovered that the key genes for most groups strongly regulated immune function activity. Furthermore, older females were predicted to have less DLBCL progression versus older males and young females. Finally, analyses in systems biology revealed that JUN and CYCS signaling were the most critical factors associated with tumor progression in older and male patients. We identified important molecular perturbations in DLBCL that were strongly associated with age and sex and were predicted to strongly influence tumor progression.
url https://doi.org/10.4137/CIN.S34144
work_keys_str_mv AT afshinbeheshti theimpactofageandsexindlbclsystemsbiologyanalysesidentifydistinctmolecularchangesandsignalingnetworks
AT donnaneuberg theimpactofageandsexindlbclsystemsbiologyanalysesidentifydistinctmolecularchangesandsignalingnetworks
AT jtysonmcdonald theimpactofageandsexindlbclsystemsbiologyanalysesidentifydistinctmolecularchangesandsignalingnetworks
AT charlesrvanderburg theimpactofageandsexindlbclsystemsbiologyanalysesidentifydistinctmolecularchangesandsignalingnetworks
AT andrewmevens theimpactofageandsexindlbclsystemsbiologyanalysesidentifydistinctmolecularchangesandsignalingnetworks
AT afshinbeheshti impactofageandsexindlbclsystemsbiologyanalysesidentifydistinctmolecularchangesandsignalingnetworks
AT donnaneuberg impactofageandsexindlbclsystemsbiologyanalysesidentifydistinctmolecularchangesandsignalingnetworks
AT jtysonmcdonald impactofageandsexindlbclsystemsbiologyanalysesidentifydistinctmolecularchangesandsignalingnetworks
AT charlesrvanderburg impactofageandsexindlbclsystemsbiologyanalysesidentifydistinctmolecularchangesandsignalingnetworks
AT andrewmevens impactofageandsexindlbclsystemsbiologyanalysesidentifydistinctmolecularchangesandsignalingnetworks
_version_ 1724601326436876288