Transcriptome and Literature Mining Highlight the Differential Expression of ERLIN1 in Immune Cells during Sepsis

Sepsis results from the dysregulation of the host immune system. This highly variable disease affects 19 million people globally, and accounts for 5 million deaths annually. In transcriptomic datasets curated from public repositories, we observed a consistent upregulation (3.26–5.29 fold) of <i&g...

Full description

Bibliographic Details
Main Authors: Susie S. Y. Huang, Mohammed Toufiq, Luis R. Saraiva, Nicholas Van Panhuys, Damien Chaussabel, Mathieu Garand
Format: Article
Language:English
Published: MDPI AG 2021-08-01
Series:Biology
Subjects:
Online Access:https://www.mdpi.com/2079-7737/10/8/755
id doaj-3b6e62b165cf49d6b1a21b5e22a44cf6
record_format Article
spelling doaj-3b6e62b165cf49d6b1a21b5e22a44cf62021-08-26T13:32:12ZengMDPI AGBiology2079-77372021-08-011075575510.3390/biology10080755Transcriptome and Literature Mining Highlight the Differential Expression of ERLIN1 in Immune Cells during SepsisSusie S. Y. Huang0Mohammed Toufiq1Luis R. Saraiva2Nicholas Van Panhuys3Damien Chaussabel4Mathieu Garand5Research Department, Sidra Medicine, Doha 26999, QatarResearch Department, Sidra Medicine, Doha 26999, QatarResearch Department, Sidra Medicine, Doha 26999, QatarResearch Department, Sidra Medicine, Doha 26999, QatarResearch Department, Sidra Medicine, Doha 26999, QatarResearch Department, Sidra Medicine, Doha 26999, QatarSepsis results from the dysregulation of the host immune system. This highly variable disease affects 19 million people globally, and accounts for 5 million deaths annually. In transcriptomic datasets curated from public repositories, we observed a consistent upregulation (3.26–5.29 fold) of <i>ERLIN1</i>—a gene coding for an ER membrane prohibitin and a regulator of inositol 1, 4, 5-trisphosphate receptors and sterol regulatory element-binding proteins—under septic conditions in healthy neutrophils, monocytes, and whole blood. In vitro expression of the ERLIN1 gene and proteins was measured by stimulating the whole blood of healthy volunteers to a combination of lipopolysaccharide and peptidoglycan. Septic stimulation induced a significant increase in <i>ERLIN1</i> expression; however, ERLIN1 was differentially expressed among the immune blood cell subsets. ERLIN1 was uniquely increased in whole blood neutrophils, and confirmed in the differentiated HL60 cell line. The scarcity of ERLIN1 in sepsis literature indicates a knowledge gap between the functions of ERLIN1, calcium homeostasis, and cholesterol and fatty acid biosynthesis, and sepsis. In combination with experimental data, we bring forth the hypothesis that ERLIN1 is variably modulated among immune cells in response to cellular perturbations, and has implications for ER functions and/or ER membrane protein components during sepsis.https://www.mdpi.com/2079-7737/10/8/755cholesterol biosynthesisimmunometabolismleukocytescalcium channelbacteremiasepsis
collection DOAJ
language English
format Article
sources DOAJ
author Susie S. Y. Huang
Mohammed Toufiq
Luis R. Saraiva
Nicholas Van Panhuys
Damien Chaussabel
Mathieu Garand
spellingShingle Susie S. Y. Huang
Mohammed Toufiq
Luis R. Saraiva
Nicholas Van Panhuys
Damien Chaussabel
Mathieu Garand
Transcriptome and Literature Mining Highlight the Differential Expression of ERLIN1 in Immune Cells during Sepsis
Biology
cholesterol biosynthesis
immunometabolism
leukocytes
calcium channel
bacteremia
sepsis
author_facet Susie S. Y. Huang
Mohammed Toufiq
Luis R. Saraiva
Nicholas Van Panhuys
Damien Chaussabel
Mathieu Garand
author_sort Susie S. Y. Huang
title Transcriptome and Literature Mining Highlight the Differential Expression of ERLIN1 in Immune Cells during Sepsis
title_short Transcriptome and Literature Mining Highlight the Differential Expression of ERLIN1 in Immune Cells during Sepsis
title_full Transcriptome and Literature Mining Highlight the Differential Expression of ERLIN1 in Immune Cells during Sepsis
title_fullStr Transcriptome and Literature Mining Highlight the Differential Expression of ERLIN1 in Immune Cells during Sepsis
title_full_unstemmed Transcriptome and Literature Mining Highlight the Differential Expression of ERLIN1 in Immune Cells during Sepsis
title_sort transcriptome and literature mining highlight the differential expression of erlin1 in immune cells during sepsis
publisher MDPI AG
series Biology
issn 2079-7737
publishDate 2021-08-01
description Sepsis results from the dysregulation of the host immune system. This highly variable disease affects 19 million people globally, and accounts for 5 million deaths annually. In transcriptomic datasets curated from public repositories, we observed a consistent upregulation (3.26–5.29 fold) of <i>ERLIN1</i>—a gene coding for an ER membrane prohibitin and a regulator of inositol 1, 4, 5-trisphosphate receptors and sterol regulatory element-binding proteins—under septic conditions in healthy neutrophils, monocytes, and whole blood. In vitro expression of the ERLIN1 gene and proteins was measured by stimulating the whole blood of healthy volunteers to a combination of lipopolysaccharide and peptidoglycan. Septic stimulation induced a significant increase in <i>ERLIN1</i> expression; however, ERLIN1 was differentially expressed among the immune blood cell subsets. ERLIN1 was uniquely increased in whole blood neutrophils, and confirmed in the differentiated HL60 cell line. The scarcity of ERLIN1 in sepsis literature indicates a knowledge gap between the functions of ERLIN1, calcium homeostasis, and cholesterol and fatty acid biosynthesis, and sepsis. In combination with experimental data, we bring forth the hypothesis that ERLIN1 is variably modulated among immune cells in response to cellular perturbations, and has implications for ER functions and/or ER membrane protein components during sepsis.
topic cholesterol biosynthesis
immunometabolism
leukocytes
calcium channel
bacteremia
sepsis
url https://www.mdpi.com/2079-7737/10/8/755
work_keys_str_mv AT susiesyhuang transcriptomeandliteraturemininghighlightthedifferentialexpressionoferlin1inimmunecellsduringsepsis
AT mohammedtoufiq transcriptomeandliteraturemininghighlightthedifferentialexpressionoferlin1inimmunecellsduringsepsis
AT luisrsaraiva transcriptomeandliteraturemininghighlightthedifferentialexpressionoferlin1inimmunecellsduringsepsis
AT nicholasvanpanhuys transcriptomeandliteraturemininghighlightthedifferentialexpressionoferlin1inimmunecellsduringsepsis
AT damienchaussabel transcriptomeandliteraturemininghighlightthedifferentialexpressionoferlin1inimmunecellsduringsepsis
AT mathieugarand transcriptomeandliteraturemininghighlightthedifferentialexpressionoferlin1inimmunecellsduringsepsis
_version_ 1721194797388005376