Overexpression of OsbHLH107, a member of the basic helix-loop-helix transcription factor family, enhances grain size in rice (Oryza sativa L.)

Abstract Background Grain size, which is determined by grain length, grain width, and grain thickness, is an important determinant for grain yield in rice. Identification and characterization of new genes that are associated with grain size will be helpful for the improvement of grain yield in rice....

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Main Authors: Xiaoming Yang, Yulong Ren, Yue Cai, Mei Niu, Zhiming Feng, Ruonan Jing, Changling Mou, Xi Liu, Lianjie Xiao, Xin Zhang, Fuqing Wu, Xiuping Guo, Ling Jiang, Jianmin Wan
Format: Article
Language:English
Published: SpringerOpen 2018-07-01
Series:Rice
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12284-018-0237-y
id doaj-3f6402d8e0a640999b2b608e16ba56bc
record_format Article
collection DOAJ
language English
format Article
sources DOAJ
author Xiaoming Yang
Yulong Ren
Yue Cai
Mei Niu
Zhiming Feng
Ruonan Jing
Changling Mou
Xi Liu
Lianjie Xiao
Xin Zhang
Fuqing Wu
Xiuping Guo
Ling Jiang
Jianmin Wan
spellingShingle Xiaoming Yang
Yulong Ren
Yue Cai
Mei Niu
Zhiming Feng
Ruonan Jing
Changling Mou
Xi Liu
Lianjie Xiao
Xin Zhang
Fuqing Wu
Xiuping Guo
Ling Jiang
Jianmin Wan
Overexpression of OsbHLH107, a member of the basic helix-loop-helix transcription factor family, enhances grain size in rice (Oryza sativa L.)
Rice
Cell cycle
Cell proliferation
bHLH
PILs
author_facet Xiaoming Yang
Yulong Ren
Yue Cai
Mei Niu
Zhiming Feng
Ruonan Jing
Changling Mou
Xi Liu
Lianjie Xiao
Xin Zhang
Fuqing Wu
Xiuping Guo
Ling Jiang
Jianmin Wan
author_sort Xiaoming Yang
title Overexpression of OsbHLH107, a member of the basic helix-loop-helix transcription factor family, enhances grain size in rice (Oryza sativa L.)
title_short Overexpression of OsbHLH107, a member of the basic helix-loop-helix transcription factor family, enhances grain size in rice (Oryza sativa L.)
title_full Overexpression of OsbHLH107, a member of the basic helix-loop-helix transcription factor family, enhances grain size in rice (Oryza sativa L.)
title_fullStr Overexpression of OsbHLH107, a member of the basic helix-loop-helix transcription factor family, enhances grain size in rice (Oryza sativa L.)
title_full_unstemmed Overexpression of OsbHLH107, a member of the basic helix-loop-helix transcription factor family, enhances grain size in rice (Oryza sativa L.)
title_sort overexpression of osbhlh107, a member of the basic helix-loop-helix transcription factor family, enhances grain size in rice (oryza sativa l.)
publisher SpringerOpen
series Rice
issn 1939-8425
1939-8433
publishDate 2018-07-01
description Abstract Background Grain size, which is determined by grain length, grain width, and grain thickness, is an important determinant for grain yield in rice. Identification and characterization of new genes that are associated with grain size will be helpful for the improvement of grain yield in rice. Results We characterized the grain size mutant, larger grain size 1 (lgs1), derived from rice activation-tagged T-DNA insertion lines. Histological analysis showed that increased cell numbers in the longitudinal direction of spikelet hulls was responsible for the grain mutant phenotype in lgs1. Quantitative real-time PCR (qRT-PCR) analysis further showed that the expression levels of genes associated with the cell cycle in the young panicles of the lgs1 were higher than those in the wild type (WT), which might result in the increased cell numbers in lgs1 spikelet hulls. Insertion site analysis together with transgenic experiments confirmed that the lgs1 phenotype was caused by enhanced expression of truncated OsbHLH107, corresponding to the nucleotide (nt) 331–846 region (i.e., the transcriptional activation region of OsbHLH107) of the OsbHLH107 coding sequence (CDS). OsbHLH107 is a nucleus-localized bHLH transcription factor, which can form a homodimer with itself. Phylogenetic analysis showed that OsbHLH107 belonged to the same subfamily as OsPILs. OsPIL13 (OsPIL1) and OsPIL16 (APG) were reported to regulate grain size in rice. By transgenic experiments, we found that OsPIL11 could also regulate grain size. Conclusion We concluded that OsbHLH107 and its homologs are important regulators of grain size development and might be useful for grain yield improvement in rice.
topic Cell cycle
Cell proliferation
bHLH
PILs
url http://link.springer.com/article/10.1186/s12284-018-0237-y
work_keys_str_mv AT xiaomingyang overexpressionofosbhlh107amemberofthebasichelixloophelixtranscriptionfactorfamilyenhancesgrainsizeinriceoryzasatival
AT yulongren overexpressionofosbhlh107amemberofthebasichelixloophelixtranscriptionfactorfamilyenhancesgrainsizeinriceoryzasatival
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AT zhimingfeng overexpressionofosbhlh107amemberofthebasichelixloophelixtranscriptionfactorfamilyenhancesgrainsizeinriceoryzasatival
AT ruonanjing overexpressionofosbhlh107amemberofthebasichelixloophelixtranscriptionfactorfamilyenhancesgrainsizeinriceoryzasatival
AT changlingmou overexpressionofosbhlh107amemberofthebasichelixloophelixtranscriptionfactorfamilyenhancesgrainsizeinriceoryzasatival
AT xiliu overexpressionofosbhlh107amemberofthebasichelixloophelixtranscriptionfactorfamilyenhancesgrainsizeinriceoryzasatival
AT lianjiexiao overexpressionofosbhlh107amemberofthebasichelixloophelixtranscriptionfactorfamilyenhancesgrainsizeinriceoryzasatival
AT xinzhang overexpressionofosbhlh107amemberofthebasichelixloophelixtranscriptionfactorfamilyenhancesgrainsizeinriceoryzasatival
AT fuqingwu overexpressionofosbhlh107amemberofthebasichelixloophelixtranscriptionfactorfamilyenhancesgrainsizeinriceoryzasatival
AT xiupingguo overexpressionofosbhlh107amemberofthebasichelixloophelixtranscriptionfactorfamilyenhancesgrainsizeinriceoryzasatival
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AT jianminwan overexpressionofosbhlh107amemberofthebasichelixloophelixtranscriptionfactorfamilyenhancesgrainsizeinriceoryzasatival
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spelling doaj-3f6402d8e0a640999b2b608e16ba56bc2020-11-25T00:37:03ZengSpringerOpenRice1939-84251939-84332018-07-0111111210.1186/s12284-018-0237-yOverexpression of OsbHLH107, a member of the basic helix-loop-helix transcription factor family, enhances grain size in rice (Oryza sativa L.)Xiaoming Yang0Yulong Ren1Yue Cai2Mei Niu3Zhiming Feng4Ruonan Jing5Changling Mou6Xi Liu7Lianjie Xiao8Xin Zhang9Fuqing Wu10Xiuping Guo11Ling Jiang12Jianmin Wan13State Key Laboratory for Crop Genetics and Germplasm Enhancement, Research Center of Jiangsu Plant Gene Engineering, Nanjing Agricultural UniversityNational Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural SciencesState Key Laboratory for Crop Genetics and Germplasm Enhancement, Research Center of Jiangsu Plant Gene Engineering, Nanjing Agricultural UniversityState Key Laboratory for Crop Genetics and Germplasm Enhancement, Research Center of Jiangsu Plant Gene Engineering, Nanjing Agricultural UniversityState Key Laboratory for Crop Genetics and Germplasm Enhancement, Research Center of Jiangsu Plant Gene Engineering, Nanjing Agricultural UniversityState Key Laboratory for Crop Genetics and Germplasm Enhancement, Research Center of Jiangsu Plant Gene Engineering, Nanjing Agricultural UniversityState Key Laboratory for Crop Genetics and Germplasm Enhancement, Research Center of Jiangsu Plant Gene Engineering, Nanjing Agricultural UniversityState Key Laboratory for Crop Genetics and Germplasm Enhancement, Research Center of Jiangsu Plant Gene Engineering, Nanjing Agricultural UniversityState Key Laboratory for Crop Genetics and Germplasm Enhancement, Research Center of Jiangsu Plant Gene Engineering, Nanjing Agricultural UniversityNational Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural SciencesNational Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural SciencesNational Key Facility for Crop Gene Resources and Genetic Improvement, Institute of Crop Science, Chinese Academy of Agricultural SciencesState Key Laboratory for Crop Genetics and Germplasm Enhancement, Research Center of Jiangsu Plant Gene Engineering, Nanjing Agricultural UniversityState Key Laboratory for Crop Genetics and Germplasm Enhancement, Research Center of Jiangsu Plant Gene Engineering, Nanjing Agricultural UniversityAbstract Background Grain size, which is determined by grain length, grain width, and grain thickness, is an important determinant for grain yield in rice. Identification and characterization of new genes that are associated with grain size will be helpful for the improvement of grain yield in rice. Results We characterized the grain size mutant, larger grain size 1 (lgs1), derived from rice activation-tagged T-DNA insertion lines. Histological analysis showed that increased cell numbers in the longitudinal direction of spikelet hulls was responsible for the grain mutant phenotype in lgs1. Quantitative real-time PCR (qRT-PCR) analysis further showed that the expression levels of genes associated with the cell cycle in the young panicles of the lgs1 were higher than those in the wild type (WT), which might result in the increased cell numbers in lgs1 spikelet hulls. Insertion site analysis together with transgenic experiments confirmed that the lgs1 phenotype was caused by enhanced expression of truncated OsbHLH107, corresponding to the nucleotide (nt) 331–846 region (i.e., the transcriptional activation region of OsbHLH107) of the OsbHLH107 coding sequence (CDS). OsbHLH107 is a nucleus-localized bHLH transcription factor, which can form a homodimer with itself. Phylogenetic analysis showed that OsbHLH107 belonged to the same subfamily as OsPILs. OsPIL13 (OsPIL1) and OsPIL16 (APG) were reported to regulate grain size in rice. By transgenic experiments, we found that OsPIL11 could also regulate grain size. Conclusion We concluded that OsbHLH107 and its homologs are important regulators of grain size development and might be useful for grain yield improvement in rice.http://link.springer.com/article/10.1186/s12284-018-0237-yCell cycleCell proliferationbHLHPILs