Lessons from model organisms: phenotypic robustness and missing heritability in complex disease.

Genetically tractable model organisms from phages to mice have taught us invaluable lessons about fundamental biological processes and disease-causing mutations. Owing to technological and computational advances, human biology and the causes of human diseases have become accessible as never before....

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Main Authors: Christine Queitsch, Keisha D Carlson, Santhosh Girirajan
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2012-01-01
Series:PLoS Genetics
Online Access:http://europepmc.org/articles/PMC3499356?pdf=render
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spelling doaj-4016040cf74047639061906223145c132020-11-25T01:11:53ZengPublic Library of Science (PLoS)PLoS Genetics1553-73901553-74042012-01-01811e100304110.1371/journal.pgen.1003041Lessons from model organisms: phenotypic robustness and missing heritability in complex disease.Christine QueitschKeisha D CarlsonSanthosh GirirajanGenetically tractable model organisms from phages to mice have taught us invaluable lessons about fundamental biological processes and disease-causing mutations. Owing to technological and computational advances, human biology and the causes of human diseases have become accessible as never before. Progress in identifying genetic determinants for human diseases has been most remarkable for Mendelian traits. In contrast, identifying genetic determinants for complex diseases such as diabetes, cancer, and cardiovascular and neurological diseases has remained challenging, despite the fact that these diseases cluster in families. Hundreds of variants associated with complex diseases have been found in genome-wide association studies (GWAS), yet most of these variants explain only a modest amount of the observed heritability, a phenomenon known as "missing heritability." The missing heritability has been attributed to many factors, mainly inadequacies in genotyping and phenotyping. We argue that lessons learned about complex traits in model organisms offer an alternative explanation for missing heritability in humans. In diverse model organisms, phenotypic robustness differs among individuals, and those with decreased robustness show increased penetrance of mutations and express previously cryptic genetic variation. We propose that phenotypic robustness also differs among humans and that individuals with lower robustness will be more responsive to genetic and environmental perturbations and hence susceptible to disease. Phenotypic robustness is a quantitative trait that can be accurately measured in model organisms, but not as yet in humans. We propose feasible approaches to measure robustness in large human populations, proof-of-principle experiments for robustness markers in model organisms, and a new GWAS design that takes differences in robustness into account.http://europepmc.org/articles/PMC3499356?pdf=render
collection DOAJ
language English
format Article
sources DOAJ
author Christine Queitsch
Keisha D Carlson
Santhosh Girirajan
spellingShingle Christine Queitsch
Keisha D Carlson
Santhosh Girirajan
Lessons from model organisms: phenotypic robustness and missing heritability in complex disease.
PLoS Genetics
author_facet Christine Queitsch
Keisha D Carlson
Santhosh Girirajan
author_sort Christine Queitsch
title Lessons from model organisms: phenotypic robustness and missing heritability in complex disease.
title_short Lessons from model organisms: phenotypic robustness and missing heritability in complex disease.
title_full Lessons from model organisms: phenotypic robustness and missing heritability in complex disease.
title_fullStr Lessons from model organisms: phenotypic robustness and missing heritability in complex disease.
title_full_unstemmed Lessons from model organisms: phenotypic robustness and missing heritability in complex disease.
title_sort lessons from model organisms: phenotypic robustness and missing heritability in complex disease.
publisher Public Library of Science (PLoS)
series PLoS Genetics
issn 1553-7390
1553-7404
publishDate 2012-01-01
description Genetically tractable model organisms from phages to mice have taught us invaluable lessons about fundamental biological processes and disease-causing mutations. Owing to technological and computational advances, human biology and the causes of human diseases have become accessible as never before. Progress in identifying genetic determinants for human diseases has been most remarkable for Mendelian traits. In contrast, identifying genetic determinants for complex diseases such as diabetes, cancer, and cardiovascular and neurological diseases has remained challenging, despite the fact that these diseases cluster in families. Hundreds of variants associated with complex diseases have been found in genome-wide association studies (GWAS), yet most of these variants explain only a modest amount of the observed heritability, a phenomenon known as "missing heritability." The missing heritability has been attributed to many factors, mainly inadequacies in genotyping and phenotyping. We argue that lessons learned about complex traits in model organisms offer an alternative explanation for missing heritability in humans. In diverse model organisms, phenotypic robustness differs among individuals, and those with decreased robustness show increased penetrance of mutations and express previously cryptic genetic variation. We propose that phenotypic robustness also differs among humans and that individuals with lower robustness will be more responsive to genetic and environmental perturbations and hence susceptible to disease. Phenotypic robustness is a quantitative trait that can be accurately measured in model organisms, but not as yet in humans. We propose feasible approaches to measure robustness in large human populations, proof-of-principle experiments for robustness markers in model organisms, and a new GWAS design that takes differences in robustness into account.
url http://europepmc.org/articles/PMC3499356?pdf=render
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