Chemosystematic of Enterobacteriaceae Familia Obtained from Blood Cultures Based on Total Protein Profiles

The purpose of this study was to determine the chemosystematic of 14 strains of bacteria in blood cultures from Semarang using 1 reference strain S. typhi NCTC 786, based on the total protein profi les with the similarity relationship analysis based on Simple Matching Coeffi cient (SSM) analysis and...

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Main Authors: Sri Darmawati, Langkah Sembiring, Widya Asmara, Wayan T. Artama, Syaiful Anwar
Format: Article
Language:English
Published: Universitas Gadjah Mada, Yogyakarta 2013-06-01
Series:Indonesian Journal of Biotechnology
Subjects:
Online Access:https://jurnal.ugm.ac.id/ijbiotech/article/view/7862
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spelling doaj-42a86f807ade4e4cac879856872ce0aa2020-11-24T21:59:21ZengUniversitas Gadjah Mada, YogyakartaIndonesian Journal of Biotechnology0853-86542089-22412013-06-01181586310.22146/ijbiotech.78626578Chemosystematic of Enterobacteriaceae Familia Obtained from Blood Cultures Based on Total Protein ProfilesSri Darmawati0Langkah Sembiring1Widya Asmara2Wayan T. Artama3Syaiful Anwar4Laboratory of Microbiology, Faculty of Nursing and Health, Universitas Muhammadiyah Semarang, SemarangLaboratory of Microbiology, Faculty of Biology, Universitas Gadjah Mada, Yogyakarta3Department of Microbiology, Faculty of Veterinary Medicine, Universitas Gadjah Mada, YogyakartaDepartment of Biochemistry, Faculty of Veterinary Medicine, Universitas Gadjah Mada, YogyakartaFaculty of Animal Husbandry, Universitas Diponegoro, SemarangThe purpose of this study was to determine the chemosystematic of 14 strains of bacteria in blood cultures from Semarang using 1 reference strain S. typhi NCTC 786, based on the total protein profi les with the similarity relationship analysis based on Simple Matching Coeffi cient (SSM) analysis and algorithm methodof unweighted pair group with averages (UPGMA) presented in a dendrogram. The results showed that thechemosystematic based on the total protein profi les using SDS-PAGE method can classify the member ofbacterial strains of each species. The Clusters respectively consist of 4 strains of S. typhi (similarity: 89.7%),2 strains of Ser. marcescens (similarity: 89.7%), two strains of E. coli, and one strain of Salmonella ssp, S. typhi NCTC 786 (similarity: 100%). Those three incorporated clusters had the similarity value of 75.3%. Those four strains of Ent. cloacae composed in one cluster (similarity: 100%) are incorporated in a cluster consisting of one strain of Kleb. pneumoniae (similarity: 92.9%). Both clusters were incorporated in a cluster consisting of S. typhi NCTC 786 (similarity: 67.9%). Key words: Enterobacteriaceae, chemosystematic, blood cultures, protein profilehttps://jurnal.ugm.ac.id/ijbiotech/article/view/7862EnterobacteriaceaeChemosystematicBlood CulturesProtein profile
collection DOAJ
language English
format Article
sources DOAJ
author Sri Darmawati
Langkah Sembiring
Widya Asmara
Wayan T. Artama
Syaiful Anwar
spellingShingle Sri Darmawati
Langkah Sembiring
Widya Asmara
Wayan T. Artama
Syaiful Anwar
Chemosystematic of Enterobacteriaceae Familia Obtained from Blood Cultures Based on Total Protein Profiles
Indonesian Journal of Biotechnology
Enterobacteriaceae
Chemosystematic
Blood Cultures
Protein profile
author_facet Sri Darmawati
Langkah Sembiring
Widya Asmara
Wayan T. Artama
Syaiful Anwar
author_sort Sri Darmawati
title Chemosystematic of Enterobacteriaceae Familia Obtained from Blood Cultures Based on Total Protein Profiles
title_short Chemosystematic of Enterobacteriaceae Familia Obtained from Blood Cultures Based on Total Protein Profiles
title_full Chemosystematic of Enterobacteriaceae Familia Obtained from Blood Cultures Based on Total Protein Profiles
title_fullStr Chemosystematic of Enterobacteriaceae Familia Obtained from Blood Cultures Based on Total Protein Profiles
title_full_unstemmed Chemosystematic of Enterobacteriaceae Familia Obtained from Blood Cultures Based on Total Protein Profiles
title_sort chemosystematic of enterobacteriaceae familia obtained from blood cultures based on total protein profiles
publisher Universitas Gadjah Mada, Yogyakarta
series Indonesian Journal of Biotechnology
issn 0853-8654
2089-2241
publishDate 2013-06-01
description The purpose of this study was to determine the chemosystematic of 14 strains of bacteria in blood cultures from Semarang using 1 reference strain S. typhi NCTC 786, based on the total protein profi les with the similarity relationship analysis based on Simple Matching Coeffi cient (SSM) analysis and algorithm methodof unweighted pair group with averages (UPGMA) presented in a dendrogram. The results showed that thechemosystematic based on the total protein profi les using SDS-PAGE method can classify the member ofbacterial strains of each species. The Clusters respectively consist of 4 strains of S. typhi (similarity: 89.7%),2 strains of Ser. marcescens (similarity: 89.7%), two strains of E. coli, and one strain of Salmonella ssp, S. typhi NCTC 786 (similarity: 100%). Those three incorporated clusters had the similarity value of 75.3%. Those four strains of Ent. cloacae composed in one cluster (similarity: 100%) are incorporated in a cluster consisting of one strain of Kleb. pneumoniae (similarity: 92.9%). Both clusters were incorporated in a cluster consisting of S. typhi NCTC 786 (similarity: 67.9%). Key words: Enterobacteriaceae, chemosystematic, blood cultures, protein profile
topic Enterobacteriaceae
Chemosystematic
Blood Cultures
Protein profile
url https://jurnal.ugm.ac.id/ijbiotech/article/view/7862
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AT langkahsembiring chemosystematicofenterobacteriaceaefamiliaobtainedfrombloodculturesbasedontotalproteinprofiles
AT widyaasmara chemosystematicofenterobacteriaceaefamiliaobtainedfrombloodculturesbasedontotalproteinprofiles
AT wayantartama chemosystematicofenterobacteriaceaefamiliaobtainedfrombloodculturesbasedontotalproteinprofiles
AT syaifulanwar chemosystematicofenterobacteriaceaefamiliaobtainedfrombloodculturesbasedontotalproteinprofiles
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