Genetic Architecture Underpinning Yield Components and Seed Mineral–Nutrients in Sesame

Genetic dissection of yield components and seed mineral-nutrient is crucial for understanding plant physiological and biochemical processes and alleviate nutrient malnutrition. Sesame (<i>Sesamum indicum</i> L.) is an orphan crop that harbors rich allelic repertoire for seed mineral–nutr...

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Main Authors: Naama Teboul, Yaron Gadri, Zipi Berkovich, Ram Reifen, Zvi Peleg
Format: Article
Language:English
Published: MDPI AG 2020-10-01
Series:Genes
Subjects:
Online Access:https://www.mdpi.com/2073-4425/11/10/1221
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spelling doaj-4374ce3b2f994fbf9b086d740e1443bc2020-11-25T03:45:08ZengMDPI AGGenes2073-44252020-10-01111221122110.3390/genes11101221Genetic Architecture Underpinning Yield Components and Seed Mineral–Nutrients in SesameNaama Teboul0Yaron Gadri1Zipi Berkovich2Ram Reifen3Zvi Peleg4The Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 7610001, IsraelThe Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 7610001, IsraelInstitute of Biochemistry, Food Science and Nutrition, The Hebrew University of Jerusalem, Rehovot 7610001, IsraelInstitute of Biochemistry, Food Science and Nutrition, The Hebrew University of Jerusalem, Rehovot 7610001, IsraelThe Robert H. Smith Institute of Plant Sciences and Genetics in Agriculture, The Hebrew University of Jerusalem, Rehovot 7610001, IsraelGenetic dissection of yield components and seed mineral-nutrient is crucial for understanding plant physiological and biochemical processes and alleviate nutrient malnutrition. Sesame (<i>Sesamum indicum</i> L.) is an orphan crop that harbors rich allelic repertoire for seed mineral–nutrients. Here, we harness this wide diversity to study the genetic architecture of yield components and seed mineral–nutrients using a core-collection of worldwide genotypes and segregating mapping population. We also tested the association between these traits and the effect of seed nutrients concentration on their bio-accessibility. Wide genetic diversity for yield components and seed mineral–nutrients was found among the core-collection. A high-density linkage map consisting of 19,309 markers was constructed and used for genetic mapping of 84 QTL associated with yield components and 50 QTL for seed minerals. To the best of our knowledge, this is the first report on mineral–nutrients QTL in sesame. Genomic regions with a cluster of overlapping QTL for several morphological and nutritional traits were identified and considered as genomic hotspots. Candidate gene analysis revealed potential functional associations between QTL and corresponding genes, which offers unique opportunities for synchronous improvement of mineral–nutrients. Our findings shed-light on the genetic architecture of yield components, seed mineral–nutrients and their inter- and intra- relationships, which may facilitate future breeding efforts to develop bio-fortified sesame cultivars.https://www.mdpi.com/2073-4425/11/10/1221bioavailabilitybiofortificationironQTL co-localizationmacronutrientsmicronutrient
collection DOAJ
language English
format Article
sources DOAJ
author Naama Teboul
Yaron Gadri
Zipi Berkovich
Ram Reifen
Zvi Peleg
spellingShingle Naama Teboul
Yaron Gadri
Zipi Berkovich
Ram Reifen
Zvi Peleg
Genetic Architecture Underpinning Yield Components and Seed Mineral–Nutrients in Sesame
Genes
bioavailability
biofortification
iron
QTL co-localization
macronutrients
micronutrient
author_facet Naama Teboul
Yaron Gadri
Zipi Berkovich
Ram Reifen
Zvi Peleg
author_sort Naama Teboul
title Genetic Architecture Underpinning Yield Components and Seed Mineral–Nutrients in Sesame
title_short Genetic Architecture Underpinning Yield Components and Seed Mineral–Nutrients in Sesame
title_full Genetic Architecture Underpinning Yield Components and Seed Mineral–Nutrients in Sesame
title_fullStr Genetic Architecture Underpinning Yield Components and Seed Mineral–Nutrients in Sesame
title_full_unstemmed Genetic Architecture Underpinning Yield Components and Seed Mineral–Nutrients in Sesame
title_sort genetic architecture underpinning yield components and seed mineral–nutrients in sesame
publisher MDPI AG
series Genes
issn 2073-4425
publishDate 2020-10-01
description Genetic dissection of yield components and seed mineral-nutrient is crucial for understanding plant physiological and biochemical processes and alleviate nutrient malnutrition. Sesame (<i>Sesamum indicum</i> L.) is an orphan crop that harbors rich allelic repertoire for seed mineral–nutrients. Here, we harness this wide diversity to study the genetic architecture of yield components and seed mineral–nutrients using a core-collection of worldwide genotypes and segregating mapping population. We also tested the association between these traits and the effect of seed nutrients concentration on their bio-accessibility. Wide genetic diversity for yield components and seed mineral–nutrients was found among the core-collection. A high-density linkage map consisting of 19,309 markers was constructed and used for genetic mapping of 84 QTL associated with yield components and 50 QTL for seed minerals. To the best of our knowledge, this is the first report on mineral–nutrients QTL in sesame. Genomic regions with a cluster of overlapping QTL for several morphological and nutritional traits were identified and considered as genomic hotspots. Candidate gene analysis revealed potential functional associations between QTL and corresponding genes, which offers unique opportunities for synchronous improvement of mineral–nutrients. Our findings shed-light on the genetic architecture of yield components, seed mineral–nutrients and their inter- and intra- relationships, which may facilitate future breeding efforts to develop bio-fortified sesame cultivars.
topic bioavailability
biofortification
iron
QTL co-localization
macronutrients
micronutrient
url https://www.mdpi.com/2073-4425/11/10/1221
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