Boosted activity by engineering the enzyme microenvironment in cascade reaction: A molecular understanding

Engineering of enzyme microenvironment can surprisingly boost the apparent activity. However, the underlying regulation mechanism is not well-studied at a molecular level so far. Here, we present a modulation of two model enzymes of cytochrome c (Cty C) and d-amino acid oxidase (DAAO) with opposite...

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Main Authors: Jing Wang, Haiyang Zhang, Deping Yin, Xiao Xu, Tianwei Tan, Yongqin Lv
Format: Article
Language:English
Published: KeAi Communications Co., Ltd. 2021-09-01
Series:Synthetic and Systems Biotechnology
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2405805X21000363
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spelling doaj-486b61890ac443d1a275318aa4b515b12021-09-29T04:26:18ZengKeAi Communications Co., Ltd.Synthetic and Systems Biotechnology2405-805X2021-09-0163163172Boosted activity by engineering the enzyme microenvironment in cascade reaction: A molecular understandingJing Wang0Haiyang Zhang1Deping Yin2Xiao Xu3Tianwei Tan4Yongqin Lv5Beijing Key Laboratory of Bioprocess, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, ChinaDepartment of Biological Science and Engineering, School of Chemistry and Biological Engineering, University of Science and Technology Beijing, Beijing, 100083, ChinaBeijing Key Laboratory of Bioprocess, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, ChinaSchool of Chemical Engineering, Nanjing University of Science and Technology, Nanjing, 210094, ChinaBeijing Key Laboratory of Bioprocess, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, ChinaBeijing Key Laboratory of Bioprocess, College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, China; Corresponding author.Engineering of enzyme microenvironment can surprisingly boost the apparent activity. However, the underlying regulation mechanism is not well-studied at a molecular level so far. Here, we present a modulation of two model enzymes of cytochrome c (Cty C) and d-amino acid oxidase (DAAO) with opposite pH-activity profiles using ionic polymers. The operational pH of poly (acrylic acid) modified Cyt C and polyallylamine modified DAAO was extended to 3–7 and 2–10 where the enzyme activity was larger than that at their optimum pH of 4.5 and 8.5 by 106% and 28%, respectively. The cascade reaction catalyzed by two modified enzymes reveals a 1.37-fold enhancement in catalytic efficiency compared with their native counterparts. The enzyme activity boosting is understood by performing the UV–vis/CD spectroscopy and molecular dynamics simulations in the atomistic level. The increased activity is ascribed to the favorable microenvironment in support of preserving enzyme native structures nearby cofactor under external perturbations.http://www.sciencedirect.com/science/article/pii/S2405805X21000363Engineering of microenvironmentIonic polymersMultienzymeBoosted activityMolecular dynamics simulationMolecular understanding
collection DOAJ
language English
format Article
sources DOAJ
author Jing Wang
Haiyang Zhang
Deping Yin
Xiao Xu
Tianwei Tan
Yongqin Lv
spellingShingle Jing Wang
Haiyang Zhang
Deping Yin
Xiao Xu
Tianwei Tan
Yongqin Lv
Boosted activity by engineering the enzyme microenvironment in cascade reaction: A molecular understanding
Synthetic and Systems Biotechnology
Engineering of microenvironment
Ionic polymers
Multienzyme
Boosted activity
Molecular dynamics simulation
Molecular understanding
author_facet Jing Wang
Haiyang Zhang
Deping Yin
Xiao Xu
Tianwei Tan
Yongqin Lv
author_sort Jing Wang
title Boosted activity by engineering the enzyme microenvironment in cascade reaction: A molecular understanding
title_short Boosted activity by engineering the enzyme microenvironment in cascade reaction: A molecular understanding
title_full Boosted activity by engineering the enzyme microenvironment in cascade reaction: A molecular understanding
title_fullStr Boosted activity by engineering the enzyme microenvironment in cascade reaction: A molecular understanding
title_full_unstemmed Boosted activity by engineering the enzyme microenvironment in cascade reaction: A molecular understanding
title_sort boosted activity by engineering the enzyme microenvironment in cascade reaction: a molecular understanding
publisher KeAi Communications Co., Ltd.
series Synthetic and Systems Biotechnology
issn 2405-805X
publishDate 2021-09-01
description Engineering of enzyme microenvironment can surprisingly boost the apparent activity. However, the underlying regulation mechanism is not well-studied at a molecular level so far. Here, we present a modulation of two model enzymes of cytochrome c (Cty C) and d-amino acid oxidase (DAAO) with opposite pH-activity profiles using ionic polymers. The operational pH of poly (acrylic acid) modified Cyt C and polyallylamine modified DAAO was extended to 3–7 and 2–10 where the enzyme activity was larger than that at their optimum pH of 4.5 and 8.5 by 106% and 28%, respectively. The cascade reaction catalyzed by two modified enzymes reveals a 1.37-fold enhancement in catalytic efficiency compared with their native counterparts. The enzyme activity boosting is understood by performing the UV–vis/CD spectroscopy and molecular dynamics simulations in the atomistic level. The increased activity is ascribed to the favorable microenvironment in support of preserving enzyme native structures nearby cofactor under external perturbations.
topic Engineering of microenvironment
Ionic polymers
Multienzyme
Boosted activity
Molecular dynamics simulation
Molecular understanding
url http://www.sciencedirect.com/science/article/pii/S2405805X21000363
work_keys_str_mv AT jingwang boostedactivitybyengineeringtheenzymemicroenvironmentincascadereactionamolecularunderstanding
AT haiyangzhang boostedactivitybyengineeringtheenzymemicroenvironmentincascadereactionamolecularunderstanding
AT depingyin boostedactivitybyengineeringtheenzymemicroenvironmentincascadereactionamolecularunderstanding
AT xiaoxu boostedactivitybyengineeringtheenzymemicroenvironmentincascadereactionamolecularunderstanding
AT tianweitan boostedactivitybyengineeringtheenzymemicroenvironmentincascadereactionamolecularunderstanding
AT yongqinlv boostedactivitybyengineeringtheenzymemicroenvironmentincascadereactionamolecularunderstanding
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