AEP-DLA: Adverse Event Prediction in Hospitalized Adult Patients Using Deep Learning Algorithms

Early prediction of clinical deterioration such as adverse events (AEs), improves patient safety. National Early Warning Score (NEWS) is widely used to predict AEs based on the aggregation of 6 physiological parameters. We took the same parameters as the features for AE prediction using deep learnin...

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Main Authors: Chieh-Liang Wu, Ming-Ju Wu, Lun-Chi Chen, Ying-Chih Lo, Chien-Chung Huang, Hsiu-Hui Yu, Mayuresh Sunil Pardeshi, Win-Tsung Lo, Ruey-Kai Sheu
Format: Article
Language:English
Published: IEEE 2021-01-01
Series:IEEE Access
Subjects:
Online Access:https://ieeexplore.ieee.org/document/9393910/
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spelling doaj-494b96aca5e1463f863341fc01c8b69c2021-04-14T23:00:32ZengIEEEIEEE Access2169-35362021-01-019556735568910.1109/ACCESS.2021.30706189393910AEP-DLA: Adverse Event Prediction in Hospitalized Adult Patients Using Deep Learning AlgorithmsChieh-Liang Wu0https://orcid.org/0000-0001-5322-7426Ming-Ju Wu1Lun-Chi Chen2https://orcid.org/0000-0002-8449-7872Ying-Chih Lo3https://orcid.org/0000-0001-6538-842XChien-Chung Huang4Hsiu-Hui Yu5Mayuresh Sunil Pardeshi6https://orcid.org/0000-0001-8144-0734Win-Tsung Lo7Ruey-Kai Sheu8https://orcid.org/0000-0002-3014-8095Department of Critical Care Medicine, Taichung Veterans General Hospital, Taichung, TaiwanDepartment of Internal Medicine, Division of Nephrology, Taichung Veterans General Hospital, Taichung, TaiwanDepartment of Computer Science, Tunghai University, Taichung, TaiwanCenter of Quality Management, Taichung Veterans General Hospital, Taichung, TaiwanDepartment of Computer Science, Tunghai University, Taichung, TaiwanDepartment of Nursing, Taichung Veterans General Hospital, Taichung, TaiwanAI Center, Tunghai University, Taichung, TaiwanDepartment of Computer Science, Tunghai University, Taichung, TaiwanDepartment of Computer Science, Tunghai University, Taichung, TaiwanEarly prediction of clinical deterioration such as adverse events (AEs), improves patient safety. National Early Warning Score (NEWS) is widely used to predict AEs based on the aggregation of 6 physiological parameters. We took the same parameters as the features for AE prediction using deep learning algorithms (AEP-DLA) among hospitalized adult patients. The aim of this study is to get better performance than traditional naïve mathematical calculations by introducing novel vital sign data preprocessing schemes. We retrospectively collected the data from our electronic medical record data warehouse (2007 ~ 2017). AE rate of all 99,861 admissions was 6.2%. The dataset was divided into training and testing datasets from 2007–2015 and 2016–2017 respectively. In real-life clinical care, physiological parameters were not recorded every hour and missed frequently, for example, Glasgow Coma Scale (GCS). The expert domain suggested that missed GCS was rated as 15. We took two strategies (stack series records and align by hour) in the data preprocessing and tripling the values of negative samples for class balancing (CB). We used the last 28 hours’ serial data to predict AEs 3 hours later with Random Forest, XGBoost, Convolutional Neural Network (CNN) and Recurrent Neural Network (RNN). It is shown that CNN with CB and align by hour got the best results comparing to the other methods. The precision, recall and area under curve were 0.841, 0.928 and 0.995 respectively. The performance of the model is also better than those proposed in the published literatures.https://ieeexplore.ieee.org/document/9393910/Adverse event (AE)early deterioration indicationearly warning scoreselectronic medical recordrisk stratification
collection DOAJ
language English
format Article
sources DOAJ
author Chieh-Liang Wu
Ming-Ju Wu
Lun-Chi Chen
Ying-Chih Lo
Chien-Chung Huang
Hsiu-Hui Yu
Mayuresh Sunil Pardeshi
Win-Tsung Lo
Ruey-Kai Sheu
spellingShingle Chieh-Liang Wu
Ming-Ju Wu
Lun-Chi Chen
Ying-Chih Lo
Chien-Chung Huang
Hsiu-Hui Yu
Mayuresh Sunil Pardeshi
Win-Tsung Lo
Ruey-Kai Sheu
AEP-DLA: Adverse Event Prediction in Hospitalized Adult Patients Using Deep Learning Algorithms
IEEE Access
Adverse event (AE)
early deterioration indication
early warning scores
electronic medical record
risk stratification
author_facet Chieh-Liang Wu
Ming-Ju Wu
Lun-Chi Chen
Ying-Chih Lo
Chien-Chung Huang
Hsiu-Hui Yu
Mayuresh Sunil Pardeshi
Win-Tsung Lo
Ruey-Kai Sheu
author_sort Chieh-Liang Wu
title AEP-DLA: Adverse Event Prediction in Hospitalized Adult Patients Using Deep Learning Algorithms
title_short AEP-DLA: Adverse Event Prediction in Hospitalized Adult Patients Using Deep Learning Algorithms
title_full AEP-DLA: Adverse Event Prediction in Hospitalized Adult Patients Using Deep Learning Algorithms
title_fullStr AEP-DLA: Adverse Event Prediction in Hospitalized Adult Patients Using Deep Learning Algorithms
title_full_unstemmed AEP-DLA: Adverse Event Prediction in Hospitalized Adult Patients Using Deep Learning Algorithms
title_sort aep-dla: adverse event prediction in hospitalized adult patients using deep learning algorithms
publisher IEEE
series IEEE Access
issn 2169-3536
publishDate 2021-01-01
description Early prediction of clinical deterioration such as adverse events (AEs), improves patient safety. National Early Warning Score (NEWS) is widely used to predict AEs based on the aggregation of 6 physiological parameters. We took the same parameters as the features for AE prediction using deep learning algorithms (AEP-DLA) among hospitalized adult patients. The aim of this study is to get better performance than traditional naïve mathematical calculations by introducing novel vital sign data preprocessing schemes. We retrospectively collected the data from our electronic medical record data warehouse (2007 ~ 2017). AE rate of all 99,861 admissions was 6.2%. The dataset was divided into training and testing datasets from 2007–2015 and 2016–2017 respectively. In real-life clinical care, physiological parameters were not recorded every hour and missed frequently, for example, Glasgow Coma Scale (GCS). The expert domain suggested that missed GCS was rated as 15. We took two strategies (stack series records and align by hour) in the data preprocessing and tripling the values of negative samples for class balancing (CB). We used the last 28 hours’ serial data to predict AEs 3 hours later with Random Forest, XGBoost, Convolutional Neural Network (CNN) and Recurrent Neural Network (RNN). It is shown that CNN with CB and align by hour got the best results comparing to the other methods. The precision, recall and area under curve were 0.841, 0.928 and 0.995 respectively. The performance of the model is also better than those proposed in the published literatures.
topic Adverse event (AE)
early deterioration indication
early warning scores
electronic medical record
risk stratification
url https://ieeexplore.ieee.org/document/9393910/
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