Structural diversity across arbuscular mycorrhizal, ectomycorrhizal, and endophytic plant–fungus networks

Abstract Background Below-ground linkage between plant and fungal communities is one of the major drivers of terrestrial ecosystem dynamics. However, we still have limited knowledge of how such plant–fungus associations vary in their community-scale properties depending on fungal functional groups a...

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Main Authors: Hirokazu Toju, Hirotoshi Sato, Satoshi Yamamoto, Akifumi S. Tanabe
Format: Article
Language:English
Published: BMC 2018-11-01
Series:BMC Plant Biology
Subjects:
Online Access:http://link.springer.com/article/10.1186/s12870-018-1500-5
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spelling doaj-495e34e7d2dc49638a9a08a62a22fac32020-11-25T02:56:06ZengBMCBMC Plant Biology1471-22292018-11-0118111210.1186/s12870-018-1500-5Structural diversity across arbuscular mycorrhizal, ectomycorrhizal, and endophytic plant–fungus networksHirokazu Toju0Hirotoshi Sato1Satoshi Yamamoto2Akifumi S. Tanabe3Center for Ecological Research, Kyoto UniversityGraduate School of Human and Environmental Studies, Kyoto UniversityGraduate School of Science, Kyoto UniversityFaculty of Science and Technology, Ryukoku UniversityAbstract Background Below-ground linkage between plant and fungal communities is one of the major drivers of terrestrial ecosystem dynamics. However, we still have limited knowledge of how such plant–fungus associations vary in their community-scale properties depending on fungal functional groups and geographic locations. Methods By compiling a high-throughput sequencing dataset of root-associated fungi in eight forests along the Japanese Archipelago, we performed a comparative analysis of arbuscular mycorrhizal, ectomycorrhizal, and saprotrophic/endophytic associations across a latitudinal gradient from cool-temperate to subtropical regions. Results In most of the plant–fungus networks analyzed, host–symbiont associations were significantly specialized but lacked “nested” architecture, which has been commonly reported in plant–pollinator and plant–seed disperser networks. In particular, the entire networks involving all functional groups of plants and fungi and partial networks consisting of ectomycorrhizal plant and fungal species/taxa displayed “anti-nested” architecture (i.e., negative nestedness scores) in many of the forests examined. Our data also suggested that geographic factors affected the organization of plant–fungus network structure. For example, the southernmost subtropical site analyzed in this study displayed lower network-level specificity of host–symbiont associations and higher (but still low) nestedness than northern localities. Conclusions Our comparative analyses suggest that arbuscular mycorrhizal, ectomycorrhizal, and saprotrophic/endophytic plant–fungus associations often lack nested network architecture, while those associations can vary, to some extent, in their community-scale properties along a latitudinal gradient. Overall, this study provides a basis for future studies that will examine how different types of plant–fungus associations collectively structure terrestrial ecosystems.http://link.springer.com/article/10.1186/s12870-018-1500-5BiodiversityCommunity ecologyCompetitive exclusionHost specificity or preferenceLatitudinal gradientsMicrobiomes
collection DOAJ
language English
format Article
sources DOAJ
author Hirokazu Toju
Hirotoshi Sato
Satoshi Yamamoto
Akifumi S. Tanabe
spellingShingle Hirokazu Toju
Hirotoshi Sato
Satoshi Yamamoto
Akifumi S. Tanabe
Structural diversity across arbuscular mycorrhizal, ectomycorrhizal, and endophytic plant–fungus networks
BMC Plant Biology
Biodiversity
Community ecology
Competitive exclusion
Host specificity or preference
Latitudinal gradients
Microbiomes
author_facet Hirokazu Toju
Hirotoshi Sato
Satoshi Yamamoto
Akifumi S. Tanabe
author_sort Hirokazu Toju
title Structural diversity across arbuscular mycorrhizal, ectomycorrhizal, and endophytic plant–fungus networks
title_short Structural diversity across arbuscular mycorrhizal, ectomycorrhizal, and endophytic plant–fungus networks
title_full Structural diversity across arbuscular mycorrhizal, ectomycorrhizal, and endophytic plant–fungus networks
title_fullStr Structural diversity across arbuscular mycorrhizal, ectomycorrhizal, and endophytic plant–fungus networks
title_full_unstemmed Structural diversity across arbuscular mycorrhizal, ectomycorrhizal, and endophytic plant–fungus networks
title_sort structural diversity across arbuscular mycorrhizal, ectomycorrhizal, and endophytic plant–fungus networks
publisher BMC
series BMC Plant Biology
issn 1471-2229
publishDate 2018-11-01
description Abstract Background Below-ground linkage between plant and fungal communities is one of the major drivers of terrestrial ecosystem dynamics. However, we still have limited knowledge of how such plant–fungus associations vary in their community-scale properties depending on fungal functional groups and geographic locations. Methods By compiling a high-throughput sequencing dataset of root-associated fungi in eight forests along the Japanese Archipelago, we performed a comparative analysis of arbuscular mycorrhizal, ectomycorrhizal, and saprotrophic/endophytic associations across a latitudinal gradient from cool-temperate to subtropical regions. Results In most of the plant–fungus networks analyzed, host–symbiont associations were significantly specialized but lacked “nested” architecture, which has been commonly reported in plant–pollinator and plant–seed disperser networks. In particular, the entire networks involving all functional groups of plants and fungi and partial networks consisting of ectomycorrhizal plant and fungal species/taxa displayed “anti-nested” architecture (i.e., negative nestedness scores) in many of the forests examined. Our data also suggested that geographic factors affected the organization of plant–fungus network structure. For example, the southernmost subtropical site analyzed in this study displayed lower network-level specificity of host–symbiont associations and higher (but still low) nestedness than northern localities. Conclusions Our comparative analyses suggest that arbuscular mycorrhizal, ectomycorrhizal, and saprotrophic/endophytic plant–fungus associations often lack nested network architecture, while those associations can vary, to some extent, in their community-scale properties along a latitudinal gradient. Overall, this study provides a basis for future studies that will examine how different types of plant–fungus associations collectively structure terrestrial ecosystems.
topic Biodiversity
Community ecology
Competitive exclusion
Host specificity or preference
Latitudinal gradients
Microbiomes
url http://link.springer.com/article/10.1186/s12870-018-1500-5
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