Impact of genetic variants of ABCB1, APOB, CAV1, and NAMPT on susceptibility to pancreatic ductal adenocarcinoma in Chinese patients

Abstract Background Among the different types of cancer, pancreatic cancer, particularly pancreatic ductal adenocarcinoma (PDAC), is the most lethal malignancy, with poor early detection rates and prognosis. The aim of the present study was to investigate the potential genetic effects of the single‐...

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Main Authors: Baohuan Li, Chuanzhen Zhang, Jingjing Wang, Meijuan Zhang, Changhong Liu, Ziping Chen
Format: Article
Language:English
Published: Wiley 2020-06-01
Series:Molecular Genetics & Genomic Medicine
Subjects:
Online Access:https://doi.org/10.1002/mgg3.1226
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spelling doaj-499154767083468783ebea09ed4f445e2020-11-25T03:20:13ZengWileyMolecular Genetics & Genomic Medicine2324-92692020-06-0186n/an/a10.1002/mgg3.1226Impact of genetic variants of ABCB1, APOB, CAV1, and NAMPT on susceptibility to pancreatic ductal adenocarcinoma in Chinese patientsBaohuan Li0Chuanzhen Zhang1Jingjing Wang2Meijuan Zhang3Changhong Liu4Ziping Chen5Department of Gastroenterology Shandong Provincial Qianfoshan Hospital Shandong University Jinan ChinaDepartment of Gastroenterology The First Affiliated Hospital of Shandong First Medical University Shandong Provincial Qianfoshan Hospital Jinan ChinaClinical Laboratory The First Affiliated Hospital of Shandong First Medical University Shandong Provincial Qianfoshan Hospital Jinan ChinaDepartment of Gastroenterology The First Affiliated Hospital of Shandong First Medical University Shandong Provincial Qianfoshan Hospital Jinan ChinaDepartment of Gastroenterology The First Affiliated Hospital of Shandong First Medical University Shandong Provincial Qianfoshan Hospital Jinan ChinaDepartment of Gastroenterology The First Affiliated Hospital of Shandong First Medical University Shandong Provincial Qianfoshan Hospital Jinan ChinaAbstract Background Among the different types of cancer, pancreatic cancer, particularly pancreatic ductal adenocarcinoma (PDAC), is the most lethal malignancy, with poor early detection rates and prognosis. The aim of the present study was to investigate the potential genetic effects of the single‐nucleotide polymorphisms (SNPs) in ABCB1 (rs1045642, rs3789243, rs4148737), APOB (rs693, rs1042031), CAV1 (rs12672038, rs1997623, rs3807987, rs7804372), and NAMPT (rs9034, rs2505568, rs61330082) on PDAC. Methods A total of 273 patients with PDAC and 263 healthy controls were genotyped using PCR and direct Sanger sequencing. Unconditional logistic regression models were used to evaluate the potential effects of the genotypes, alleles, and haplotypes on the risk of developing PDAC. Results Patients with PDAC possessed a considerably lower frequency of genotypes AG, GG, and allele G at ABCB1 rs4148737 compared with controls. Based on age, sex, smoking status, drinking status, diabetes, and family history of cancer, stratified analyses showed a significant correlation between SNPs at rs4148737 and PDAC. According to specific SNPs, eight haplotypes were constructed along with ABCB1 rs4148737, rs1045642, and rs3789243. Carriers with haplotypes ACC and ATC were more susceptible to developing PDAC, whereas haplotypes GCC and GTC were associated with a reduced likelihood of developing PDAC. The distributions of the other SNPs in each group were not significantly associated with PDAC risk. Conclusions These results suggested that genetic polymorphisms of ABCB1 rs4148737 may influence an individual's risk of developing PDAC.https://doi.org/10.1002/mgg3.1226ABCB1APOBCAV1genetic polymorphismNAMPTpancreatic ductal adenocarcinoma
collection DOAJ
language English
format Article
sources DOAJ
author Baohuan Li
Chuanzhen Zhang
Jingjing Wang
Meijuan Zhang
Changhong Liu
Ziping Chen
spellingShingle Baohuan Li
Chuanzhen Zhang
Jingjing Wang
Meijuan Zhang
Changhong Liu
Ziping Chen
Impact of genetic variants of ABCB1, APOB, CAV1, and NAMPT on susceptibility to pancreatic ductal adenocarcinoma in Chinese patients
Molecular Genetics & Genomic Medicine
ABCB1
APOB
CAV1
genetic polymorphism
NAMPT
pancreatic ductal adenocarcinoma
author_facet Baohuan Li
Chuanzhen Zhang
Jingjing Wang
Meijuan Zhang
Changhong Liu
Ziping Chen
author_sort Baohuan Li
title Impact of genetic variants of ABCB1, APOB, CAV1, and NAMPT on susceptibility to pancreatic ductal adenocarcinoma in Chinese patients
title_short Impact of genetic variants of ABCB1, APOB, CAV1, and NAMPT on susceptibility to pancreatic ductal adenocarcinoma in Chinese patients
title_full Impact of genetic variants of ABCB1, APOB, CAV1, and NAMPT on susceptibility to pancreatic ductal adenocarcinoma in Chinese patients
title_fullStr Impact of genetic variants of ABCB1, APOB, CAV1, and NAMPT on susceptibility to pancreatic ductal adenocarcinoma in Chinese patients
title_full_unstemmed Impact of genetic variants of ABCB1, APOB, CAV1, and NAMPT on susceptibility to pancreatic ductal adenocarcinoma in Chinese patients
title_sort impact of genetic variants of abcb1, apob, cav1, and nampt on susceptibility to pancreatic ductal adenocarcinoma in chinese patients
publisher Wiley
series Molecular Genetics & Genomic Medicine
issn 2324-9269
publishDate 2020-06-01
description Abstract Background Among the different types of cancer, pancreatic cancer, particularly pancreatic ductal adenocarcinoma (PDAC), is the most lethal malignancy, with poor early detection rates and prognosis. The aim of the present study was to investigate the potential genetic effects of the single‐nucleotide polymorphisms (SNPs) in ABCB1 (rs1045642, rs3789243, rs4148737), APOB (rs693, rs1042031), CAV1 (rs12672038, rs1997623, rs3807987, rs7804372), and NAMPT (rs9034, rs2505568, rs61330082) on PDAC. Methods A total of 273 patients with PDAC and 263 healthy controls were genotyped using PCR and direct Sanger sequencing. Unconditional logistic regression models were used to evaluate the potential effects of the genotypes, alleles, and haplotypes on the risk of developing PDAC. Results Patients with PDAC possessed a considerably lower frequency of genotypes AG, GG, and allele G at ABCB1 rs4148737 compared with controls. Based on age, sex, smoking status, drinking status, diabetes, and family history of cancer, stratified analyses showed a significant correlation between SNPs at rs4148737 and PDAC. According to specific SNPs, eight haplotypes were constructed along with ABCB1 rs4148737, rs1045642, and rs3789243. Carriers with haplotypes ACC and ATC were more susceptible to developing PDAC, whereas haplotypes GCC and GTC were associated with a reduced likelihood of developing PDAC. The distributions of the other SNPs in each group were not significantly associated with PDAC risk. Conclusions These results suggested that genetic polymorphisms of ABCB1 rs4148737 may influence an individual's risk of developing PDAC.
topic ABCB1
APOB
CAV1
genetic polymorphism
NAMPT
pancreatic ductal adenocarcinoma
url https://doi.org/10.1002/mgg3.1226
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