Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia

This study was examined to reveal haplotype distribution and phylogenetic relationship using mitochondrial DNA CYTB gene sequences of Reeve’s turtle (Mauremys reevesii) of East Asia. CYTB sequences of Reeve’s turtles were divided into 6 haplotypes (Hap01–Hap06). Chinese turtles were found in Hap01,...

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Main Authors: Hong-Shik Oh, Seon-Mi Park, Sang-Hyun Han
Format: Article
Language:English
Published: Elsevier 2017-03-01
Series:Journal of Asia-Pacific Biodiversity
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S2287884X17300092
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spelling doaj-4a3067707d9545299be7df7a3ec73c1e2021-04-02T01:52:08ZengElsevierJournal of Asia-Pacific Biodiversity2287-884X2017-03-01101273110.1016/j.japb.2016.12.003Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East AsiaHong-Shik Oh0Seon-Mi Park1Sang-Hyun Han2Faculty of Science Education, Jeju National University, Jeju, South KoreaFaculty of Science Education, Jeju National University, Jeju, South KoreaEducational Science Research Institute, Jeju National University, Jeju, South KoreaThis study was examined to reveal haplotype distribution and phylogenetic relationship using mitochondrial DNA CYTB gene sequences of Reeve’s turtle (Mauremys reevesii) of East Asia. CYTB sequences of Reeve’s turtles were divided into 6 haplotypes (Hap01–Hap06). Chinese turtles were found in Hap01, Hap02, Hap04, and Hap05, and Hap01 was the highest frequency of 85.0%. Korean Turtles were found in Hap01, Hap03, Hap04, and Hap05, and Hap03 was the highest frequency of 52.1%. Although there was no haplotype which includes only the CYTB sequence exclusive for Reeve’s turtles of Korea, since no CYTB sequence of China was found in Hap03, it would be possible that Hap03 turtles of Korea are separated from those of China. The haplotypes of Reeve’s turtles of East Asia were monophyletic, which indicated that they had been evolved from a single maternal lineage, but went through local evolution after geographical migration and isolation in East Asia.http://www.sciencedirect.com/science/article/pii/S2287884X17300092cytochrome bgeographical migrationhaplotypematernal ancestorReeve's Turtle
collection DOAJ
language English
format Article
sources DOAJ
author Hong-Shik Oh
Seon-Mi Park
Sang-Hyun Han
spellingShingle Hong-Shik Oh
Seon-Mi Park
Sang-Hyun Han
Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia
Journal of Asia-Pacific Biodiversity
cytochrome b
geographical migration
haplotype
maternal ancestor
Reeve's Turtle
author_facet Hong-Shik Oh
Seon-Mi Park
Sang-Hyun Han
author_sort Hong-Shik Oh
title Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia
title_short Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia
title_full Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia
title_fullStr Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia
title_full_unstemmed Mitochondrial haplotype distribution and phylogenetic relationship of an endangered species Reeve's turtle (Mauremys reevesii) in East Asia
title_sort mitochondrial haplotype distribution and phylogenetic relationship of an endangered species reeve's turtle (mauremys reevesii) in east asia
publisher Elsevier
series Journal of Asia-Pacific Biodiversity
issn 2287-884X
publishDate 2017-03-01
description This study was examined to reveal haplotype distribution and phylogenetic relationship using mitochondrial DNA CYTB gene sequences of Reeve’s turtle (Mauremys reevesii) of East Asia. CYTB sequences of Reeve’s turtles were divided into 6 haplotypes (Hap01–Hap06). Chinese turtles were found in Hap01, Hap02, Hap04, and Hap05, and Hap01 was the highest frequency of 85.0%. Korean Turtles were found in Hap01, Hap03, Hap04, and Hap05, and Hap03 was the highest frequency of 52.1%. Although there was no haplotype which includes only the CYTB sequence exclusive for Reeve’s turtles of Korea, since no CYTB sequence of China was found in Hap03, it would be possible that Hap03 turtles of Korea are separated from those of China. The haplotypes of Reeve’s turtles of East Asia were monophyletic, which indicated that they had been evolved from a single maternal lineage, but went through local evolution after geographical migration and isolation in East Asia.
topic cytochrome b
geographical migration
haplotype
maternal ancestor
Reeve's Turtle
url http://www.sciencedirect.com/science/article/pii/S2287884X17300092
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