Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants

Weeds are becoming increasingly resistant to our current herbicides, posing a significant threat to agricultural production. Therefore, new herbicides with novel modes of action are urgently needed. In this study, we exploited a novel herbicide target, dihydrodipicolinate synthase (DHDPS), which cat...

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Main Authors: Tatiana P Soares da Costa, Cody J Hall, Santosh Panjikar, Jessica A Wyllie, Rebecca M Christoff, Saadi Bayat, Mark D Hulett, Belinda M Abbott, Anthony R Gendall, Matthew A Perugini
Format: Article
Language:English
Published: eLife Sciences Publications Ltd 2021-07-01
Series:eLife
Subjects:
Online Access:https://elifesciences.org/articles/69444
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spelling doaj-4a54238d54044027a2091d81d099209c2021-08-05T15:36:01ZengeLife Sciences Publications LtdeLife2050-084X2021-07-011010.7554/eLife.69444Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plantsTatiana P Soares da Costa0https://orcid.org/0000-0002-6275-7485Cody J Hall1Santosh Panjikar2https://orcid.org/0000-0001-7429-3879Jessica A Wyllie3Rebecca M Christoff4Saadi Bayat5Mark D Hulett6https://orcid.org/0000-0003-2072-5968Belinda M Abbott7Anthony R Gendall8https://orcid.org/0000-0002-2255-3939Matthew A Perugini9Department of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Bundoora, AustraliaDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Bundoora, AustraliaAustralian Synchrotron, ANSTO, Clayton, Australia; Department of Molecular Biology and Biochemistry, Monash University, Melbourne, AustraliaDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Bundoora, AustraliaDepartment of Chemistry and Physics, La Trobe Institute for Molecular Science, La Trobe University, Bundoora, AustraliaDepartment of Chemistry and Physics, La Trobe Institute for Molecular Science, La Trobe University, Bundoora, AustraliaDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Bundoora, AustraliaDepartment of Chemistry and Physics, La Trobe Institute for Molecular Science, La Trobe University, Bundoora, AustraliaDepartment of Animal, Plant and Soil Sciences, AgriBio, La Trobe University, Bundoora, Australia; Australian Research Council Research Hub for Medicinal Agriculture, Bundoora, AustraliaDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, Bundoora, AustraliaWeeds are becoming increasingly resistant to our current herbicides, posing a significant threat to agricultural production. Therefore, new herbicides with novel modes of action are urgently needed. In this study, we exploited a novel herbicide target, dihydrodipicolinate synthase (DHDPS), which catalyses the first and rate-limiting step in lysine biosynthesis. The first class of plant DHDPS inhibitors with micromolar potency against Arabidopsis thaliana DHDPS was identified using a high-throughput chemical screen. We determined that this class of inhibitors binds to a novel and unexplored pocket within DHDPS, which is highly conserved across plant species. The inhibitors also attenuated the germination and growth of A. thaliana seedlings and confirmed their pre-emergence herbicidal activity in soil-grown plants. These results provide proof-of-concept that lysine biosynthesis represents a promising target for the development of herbicides with a novel mode of action to tackle the global rise of herbicide-resistant weeds.https://elifesciences.org/articles/69444lysineenzymesherbicide
collection DOAJ
language English
format Article
sources DOAJ
author Tatiana P Soares da Costa
Cody J Hall
Santosh Panjikar
Jessica A Wyllie
Rebecca M Christoff
Saadi Bayat
Mark D Hulett
Belinda M Abbott
Anthony R Gendall
Matthew A Perugini
spellingShingle Tatiana P Soares da Costa
Cody J Hall
Santosh Panjikar
Jessica A Wyllie
Rebecca M Christoff
Saadi Bayat
Mark D Hulett
Belinda M Abbott
Anthony R Gendall
Matthew A Perugini
Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants
eLife
lysine
enzymes
herbicide
author_facet Tatiana P Soares da Costa
Cody J Hall
Santosh Panjikar
Jessica A Wyllie
Rebecca M Christoff
Saadi Bayat
Mark D Hulett
Belinda M Abbott
Anthony R Gendall
Matthew A Perugini
author_sort Tatiana P Soares da Costa
title Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants
title_short Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants
title_full Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants
title_fullStr Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants
title_full_unstemmed Towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants
title_sort towards novel herbicide modes of action by inhibiting lysine biosynthesis in plants
publisher eLife Sciences Publications Ltd
series eLife
issn 2050-084X
publishDate 2021-07-01
description Weeds are becoming increasingly resistant to our current herbicides, posing a significant threat to agricultural production. Therefore, new herbicides with novel modes of action are urgently needed. In this study, we exploited a novel herbicide target, dihydrodipicolinate synthase (DHDPS), which catalyses the first and rate-limiting step in lysine biosynthesis. The first class of plant DHDPS inhibitors with micromolar potency against Arabidopsis thaliana DHDPS was identified using a high-throughput chemical screen. We determined that this class of inhibitors binds to a novel and unexplored pocket within DHDPS, which is highly conserved across plant species. The inhibitors also attenuated the germination and growth of A. thaliana seedlings and confirmed their pre-emergence herbicidal activity in soil-grown plants. These results provide proof-of-concept that lysine biosynthesis represents a promising target for the development of herbicides with a novel mode of action to tackle the global rise of herbicide-resistant weeds.
topic lysine
enzymes
herbicide
url https://elifesciences.org/articles/69444
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