A universal genome sequencing method for rotavirus A from human fecal samples which identifies segment reassortment and multi-genotype mixed infection

A universal genome sequencing method for rotavirus A from human fecal samples which identifies segment reassortment and multi-genotype mixed infection

Abstract Background Genomic characterization of rotavirus (RoV) has not been adopted at large-scale due to the complexity of obtaining sequences for all 11 segments, particularly when feces are used as starting material. Methods To overcome these limitations, we developed a novel RoV capture and gen...

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Bibliographic Details
Main Authors: Tran Thi Ngoc Dung, Pham Thanh Duy, October M. Sessions, Uma K. Sangumathi, Voong Vinh Phat, Pham Thi Thanh Tam, Nguyen Thi Nguyen To, Tran My Phuc, Tran Thi Hong Chau, Nguyen Ngoc Minh Chau, Ngoc Nguyen Minh, Guy E. Thwaites, Maia A. Rabaa, Stephen Baker
Format: Article
Language:English
Published: BMC 2017-04-01
Series:BMC Genomics
Subjects:
Rotavirus A
Genomics
Phylogenetics
Genome sequencing
Reassortment
Co-infection
Online Access:http://link.springer.com/article/10.1186/s12864-017-3714-6

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http://link.springer.com/article/10.1186/s12864-017-3714-6

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