Comprehensive Transcriptomic Comparison between Porcine CD8<sup>−</sup> and CD8<sup>+</sup> Gamma Delta T Cells Revealed Distinct Immune Phenotype

We aimed to comprehensively understand the functional mechanisms of immunity, especially of the CD8<sup>+/−</sup> subsets of gamma delta (γδ) T cells, using an RNA-sequencing analysis. Herein, γδ T cells were obtained from bronchial lymph node tissues of 38-day-old (after weaning 10-day:...

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Bibliographic Details
Main Authors: Sangwook Kim, Byeonghwi Lim, Sameer-ul-Salam Mattoo, Eun-Young Oh, Chang-Gi Jeong, Won-Il Kim, Kyung-Tai Lee, Sang-Myeong Lee, Jun-Mo Kim
Format: Article
Language:English
Published: MDPI AG 2021-07-01
Series:Animals
Subjects:
CD8
pig
Online Access:https://www.mdpi.com/2076-2615/11/8/2165
Description
Summary:We aimed to comprehensively understand the functional mechanisms of immunity, especially of the CD8<sup>+/−</sup> subsets of gamma delta (γδ) T cells, using an RNA-sequencing analysis. Herein, γδ T cells were obtained from bronchial lymph node tissues of 38-day-old (after weaning 10-day: D10) and 56-day-old (after weaning 28-day: D28) weaned pigs and sorted into CD8<sup>+</sup> and CD8<sup>−</sup> groups. Differentially expressed genes (DEGs) were identified based on the CD8 groups at D10 and D28 time points. We confirmed 1699 DEGs between D10 CD8<sup>+</sup> versus D10 CD8<sup>−</sup> groups and 1784 DEGs between D28 CD8<sup>+</sup> versus D28 CD8<sup>−</sup> groups; 646 upregulated and 561 downregulated DEGs were common. The common upregulated DEGs were enriched in the cytokine–cytokine receptor interaction and T cell receptor (TCR) signaling pathway, and the common downregulated DEGs were enriched in the B cell receptor signaling pathway. Further, chemokine-related genes, interferon gamma, and CD40 ligand were involved in the cytokine–cytokine receptor interaction and TCR signaling pathway, which are associated with inter-regulation in immunity. We expect our results to form the basic data required for understanding the mechanisms of γδ T cells in pigs; however, further studies are required in order to reveal the dynamic changes in γδ T cells under pathogenic infections, such as those by viruses.
ISSN:2076-2615